Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02909 ATGAAGAGATTGAGGTCCAGCGATGATCTTCACTCGTACGGAGGCGACAAGAATAGCAATGGTTGCAAGGATTCGAGTAATCTGAACCGTTCGTTTTCGTCGGCGCAGCGGAGTTGCTACTACAAGCCTGAGAATGCGCGAAAAGGTTTGGTCTCGTCCTCGTCGTCCCGGTACGAGAGGGATCGGGCGGTTGAGGAGGACCGGGAGGGTTCGAGGGTGGTTCGGAAGCGATCTGAGCACGATTTCGATGGATTTGATCGTAGGAAAGGGTTCGATCGGTACAGAGAGAGTGACCGGAGTTTGATGCACCGGTCGGAGAGTTTCTGCAGCGGTGGATCGCGGAGGGATCAGTTTCCGAAGGGGTTTCGGTCGGAGAGAGAGCGGTCGCGGAGGGAGGGAAGTGTGTCGTCTTGGCGGAGAGGGTTGAAGGATTTGGATGACAGGGAGAGGGTGGTGCGTTCGCCTAAGGGTTTGAGGGATGTGAAGTCTCCGTCTTGGTCCAAGGATTCTGTTTCGGAGAGCGAGCAATCTAAGAAGAGATCTTCTTCTCCCAGGCCCTTCAGAGAGGGTAACTCCAACAAGTCTAAGTCTAAGTCTCCCACTTGGTCTAAGGATTCTATTTCGGAGAGCGAGCAGTCCAAGAGTGTTGAGGTGAAGAAGGCCGAAGAGGAGTTGTTGCAGCAGGTTCAGAGTGGTAGCAGTAGTGAGATGGAAGAAGGTGAGCTTGAACCTGAACCCCAAACGGATGTGGTTCCTCCTGCTAGTGAAGACTTGGCTCCCTCTGTTAATTTGGAGACTGATGAGAAGGAAGTTCAGAAGAATGAATGCCACCCTAATGATGATGACACTGATGCTATCATGGATGAGAGACAAGGGTTGTCGTCTAAGGAAGAGGTGAAACCTAATAATGAGGAGGTTCGTTGTGATGTTGAGGATGAAGAGAAAGAGGTTGATAAGCTGCCGGATGTTCAGGATGATTCGACCTTGAAAATGGTTGTTACTGAGACTGAACTTGGTTCTGTGGGTAATGATGATGATGATGATAAAAGAGAGGAGTGTTTGGATGCGGGTGCTGAGGGCGAGGAGGAAACAAAGAAGGGTGCGGATGTGGAGAAGGAGAAGGTGGTGTTGAATGAAAATGAGAACATAGAGGAGAAGGGTGTAGATCTGGGAACCAGCACGGATGTTGTCAAACCTGAGTTAAATTATGGAGTATCAACAGAAAATGAAGTTCCCAAGGAATTGGATAGAGGAGTTATGGTGAGTGTCGTTAACAATGTGAAGGATAAAGGGAAAGGAATTTCTGTAGCACTTGCACCTCCTATTGATGCTGCTCATTCTTTGGATGATGGCTTGTGGATGGACAGAGGTTCGACGGACCTCCCAACGTGTTCTGTTGATATTATAGAAGGTCCAAGCACAAGGGGATTTGAGTTGTTCTCCAGATCTCCTGTTAGAAAAGTGGAGAAGGTAGACCACTCGGTTCTCAACAAGCACAAGGATGATTTGGAGCAGCTTGATCTTACTCTTAGCTTGCCGAATGTTTTGTTACCTATTGGTGCTCATGAGACTGGAGCTCATGAGACATCATCTCAAGCCCCTGGATCCCCCAGTCAAGCAAGGAGTGTGCAGTCTTTAAGTAATACATTTTGTACCAACTCAGATGGTTTTCCCGCATCAATGTCCTTTTCAGGTTCACAATCATTCTATCACAATCCAAGCTGTTCTCTGACAAAAAACTCAGTGGATTATGAACAATCTGTTGGCAGTCGCCCTTTGTTCCAGGGAATAGATCAAGTTTCGCAAGGATGTTGGCAAGGTCAGTCTCAGAGTGATCCCAAACAGAAAGAAGTTCCTTTTGGTCAAAGAACCTTGGTGAATGCAAATGGCTCCCTTTTCCAGTCTCAGGCATCATGGGGTGTTTTAGACAGTCAAGCTGTGAAGGGTCAACATTCCAGGCTTCTAGAAGGAACTTCAAAAGTTGGGGGTGGACTTGACAGGCAATTGAGTTTTCACAAGCAGTTTTCAGGGCAGTCAAGACGCCATGATGATGTTAGATCTCCGTCACATAGTGTTGGGTCTCATGATATTGGATCAAATTATAGCTTTGAGAAAAAGAGGGAGGTTAGAGACAGGAGTAGTGGTAGTCTGTATCGAACTACCAGCCAGAAGGAACAAGAACAACTGATGGGGGGAGCTGATTTTGTTGAGACAATCATTGCAAGAATTGTTTCTGAACCTGTTCATGCAATGTCTAGAAAGTTTCATGAAATGACCGGACAGTCCATAACATGTCTCAAAGAGGGTATTCGAGAAATCATGCTCAACGCTGATAAGCACGGACAAATACTTGCTTTTCAAAAAGTTCTGCAGAACAGGTCCGATATAATCTTGGATGTCCTATTGAAGTGCCACCGAGTGCAACTGGAAATTTTGGTTGCTTTAAAAACTGGTTTGACTCATTTCCTTCATCTAGATAGCAGCATTTCATCTTCTGAGTTGGCTCAAATTTTTCTAAACTTACGGTGTAAGAATCTTTCATGCCGAAGTCAGTTACCTGTGGATGAATGTGATTGCAAGGTTTGTGCGCAGAAGAATGGTTTTTGCAGAGAATGTATGTGCCTTGTGTGTTATAAGTTTGACAATGCCTCAAATACTTGTAGCTGGGTTGGATGTGATGTTTGCCTTCACTGGTGCCATACTGACTGTGGATTACGGGAATCTTATATTAGAAATGGGCATGGGACGAAAGGGATGACTGAAATGCAGTTTCACTGTATTGCTTGTGACCATCCTTCTGAGATGTTTGGCTTTGTCAAGGAGGTGTTTCATAATTTTGCAAAAGAATGGTCAGTTGAAGCCCTTTGCAAAGAGCTTGAATATGTAAAGAGGATTTTTTCTGCCAGCAAGGATATGAGAGGAAGACAGTTGCATGAGATTGCAGAGCAAATGCTGCCAAGGTTGGCAAATAAGTCTAATCTTCCAGATGTTTTGAGGCACATCATGTCTTTCCTTTCAGATGGTGATTCTTCCAAATTAGCAATGGTAACATTTTCTGGTAAGGAGCAAATTAAAGAAAACAATGGAGTAGCTGGGCCCAGCCAGGAAGCAGCTTGGATGAAATCTATTTATTCAGAAAAACCATCTCTGTTAGAAAGGCCTGCAAATATCCTTCCTGCCTTTGACCAGAACGATAAAAGAACTCTTTCACAAGAATTGCAGATGAGTAGCATCCAGAAGGACTACTGTTTTGACGAATTGGAGAGTGTAGTAAAAATTAAACAGGCAGAGGCTAAAATGTTTCAATCACGTGCTGATGATGCTAGAAGAGAAGCTGAAGGGTTGAAGCGCATTGCCCTTGCAAAGAATGAGAAAATTGAGGAAGAATATGCCAATCGAATTGCCAAGTTGCGATTGACTGAGACTGATGAAATTCGGAAACAAAAATTTGAAGAAGCCCAAGCATTAGAGAGGGCACATCTGGAGTATTTGAACATGAAAAGGAGAATGGAGACAGACATTAAAGATCTGTTATCCAAAATGGAAGCTACTAAAATGAGCCTTGCCATGTGA 3573 0.4472 MKRLRSSDDLHSYGGDKNSNGCKDSSNLNRSFSSAQRSCYYKPENARKGLVSSSSSRYERDRAVEEDREGSRVVRKRSEHDFDGFDRRKGFDRYRESDRSLMHRSESFCSGGSRRDQFPKGFRSERERSRREGSVSSWRRGLKDLDDRERVVRSPKGLRDVKSPSWSKDSVSESEQSKKRSSSPRPFREGNSNKSKSKSPTWSKDSISESEQSKSVEVKKAEEELLQQVQSGSSSEMEEGELEPEPQTDVVPPASEDLAPSVNLETDEKEVQKNECHPNDDDTDAIMDERQGLSSKEEVKPNNEEVRCDVEDEEKEVDKLPDVQDDSTLKMVVTETELGSVGNDDDDDKREECLDAGAEGEEETKKGADVEKEKVVLNENENIEEKGVDLGTSTDVVKPELNYGVSTENEVPKELDRGVMVSVVNNVKDKGKGISVALAPPIDAAHSLDDGLWMDRGSTDLPTCSVDIIEGPSTRGFELFSRSPVRKVEKVDHSVLNKHKDDLEQLDLTLSLPNVLLPIGAHETGAHETSSQAPGSPSQARSVQSLSNTFCTNSDGFPASMSFSGSQSFYHNPSCSLTKNSVDYEQSVGSRPLFQGIDQVSQGCWQGQSQSDPKQKEVPFGQRTLVNANGSLFQSQASWGVLDSQAVKGQHSRLLEGTSKVGGGLDRQLSFHKQFSGQSRRHDDVRSPSHSVGSHDIGSNYSFEKKREVRDRSSGSLYRTTSQKEQEQLMGGADFVETIIARIVSEPVHAMSRKFHEMTGQSITCLKEGIREIMLNADKHGQILAFQKVLQNRSDIILDVLLKCHRVQLEILVALKTGLTHFLHLDSSISSSELAQIFLNLRCKNLSCRSQLPVDECDCKVCAQKNGFCRECMCLVCYKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHGTKGMTEMQFHCIACDHPSEMFGFVKEVFHNFAKEWSVEALCKELEYVKRIFSASKDMRGRQLHEIAEQMLPRLANKSNLPDVLRHIMSFLSDGDSSKLAMVTFSGKEQIKENNGVAGPSQEAAWMKSIYSEKPSLLERPANILPAFDQNDKRTLSQELQMSSIQKDYCFDELESVVKIKQAEAKMFQSRADDARREAEGLKRIALAKNEKIEEEYANRIAKLRLTETDEIRKQKFEEAQALERAHLEYLNMKRRMETDIKDLLSKMEATKMSLAM 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02909 1190 CDD PHD_OBE1_like 873 929 IPR047578 -
Spst2g02909 1190 MobiDBLite consensus disorder prediction 54 88 - -
Spst2g02909 1190 MobiDBLite consensus disorder prediction 210 224 - -
Spst2g02909 1190 MobiDBLite consensus disorder prediction 1 29 - -
Spst2g02909 1190 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1187 IPR004082 -
Spst2g02909 1190 Coils Coil 1091 1129 - -
Spst2g02909 1190 MobiDBLite consensus disorder prediction 118 157 - -
Spst2g02909 1190 Pfam PHD - plant homeodomain finger protein 843 963 IPR032881 -
Spst2g02909 1190 MobiDBLite consensus disorder prediction 343 368 - -
Spst2g02909 1190 MobiDBLite consensus disorder prediction 524 544 - -
Spst2g02909 1190 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 880 900 IPR004082 -
Spst2g02909 1190 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1085 1105 IPR004082 -
Spst2g02909 1190 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 754 776 IPR004082 -
Spst2g02909 1190 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 950 969 IPR004082 -
Spst2g02909 1190 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 834 855 IPR004082 -
Spst2g02909 1190 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1124 1146 IPR004082 -
Spst2g02909 1190 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 793 808 IPR004082 -
Spst2g02909 1190 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 808 823 IPR004082 -
Spst2g02909 1190 MobiDBLite consensus disorder prediction 673 725 - -
Spst2g02909 1190 MobiDBLite consensus disorder prediction 262 314 - -
Spst2g02909 1190 MobiDBLite consensus disorder prediction 700 714 - -
Spst2g02909 1190 MobiDBLite consensus disorder prediction 676 690 - -
Spst2g02909 1190 MobiDBLite consensus disorder prediction 525 544 - -
Spst2g02909 1190 MobiDBLite consensus disorder prediction 43 88 - -
Spst2g02909 1190 MobiDBLite consensus disorder prediction 102 368 - -
Spst2g02909 1190 Pfam Coiled-coil region of Oberon 1063 1178 IPR032535 -
Spst2g02909 1190 MobiDBLite consensus disorder prediction 186 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02909 Spst-Chr2 28858014 28862457 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02909 843 988 PHD Gene Family AT5G57380 27.397 1.80e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02909 - - gmx:100817003 1937.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02909 2 28858014 28862457 Spst2g02909 2 28858014 28862457 ECH