Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02905 ATGGGGTACCTCTACCCTTCTTGTAGAGCCGAATCCGCGGTTTCAACCTCCAATTCGGTGTCTTCTTCCAAAGCAACCAAAGAGAAAGAGAAGGAGAAAAGCAGTATCAAGATCCAAGAGTTTCAGTACAGTGACCTCGAAGCTGCCACCAATGGCTTCTCCGACCGAAAGCTCCTCGGCAAAGGGAGTCATGGGTATGTCTACAAGGCGGTGGTTCGCGGCCGTCCCGTGGCGGTGAAGCGTCCGTCGCGGCCTCATCATCACGGGGTTGTTCCCCGACCCGTGTCTTCTTCCGCGCCGCTCGAGATCACCAACGAGGTGGACAACGAGATCGACATCTTGTCCAAAATCCAGAGCCCCAGGTTGGTGAATTTAGTGGGTTTCACTAACGATTCAAGAGACAGGCTTTTGGTGGTGGAGTTCATGAGCAATGGGACCCTTTACGATGTTCTTCATTCATCTCCAAGGCCTCCCAATTGGGGTAGGAGAATTCGTTTGGCTCTGCAAACTGCAAAAGCCATTGACACACTTCACTCCTCGACCCCTCCCGTGATTCACCGTGACATAAAGTCTGCGAATGTTCTCATCGACCGCAGCTACAATGCGAGGTTGGGTGATTTTGGTTTGGCTTTAAGAGGCCATGTTGATGACTATAGACTCAGGTCCACTCCCCCTGCTGGCACCATGGGCTATCTTGACCCTTGTTATGTCACTCCTGATAATTTGAGCACTAAAACCGATGTTTTCAGCTTTGGGATTTTGTTGTTGGAGATTATAAGTGGAAGGAAGGCCATCGATATCTCTTATTCACCACCTTCTATCGTGGATTGGGCTATTCCTCTCATTAAGAAAGGGAAGTTGTTGGCTGTTTATGATCCTAGAATTGCACCTCCTAAGGATCCGCTTGTGAGGAAGCAGTTGGCTGTGATTGCTGCCAAGTGTGTGAGGTCTTGCAGGGAGAGGAGACCCTCCATGAAGGACGTTGTTACTTGGCTTTGTGGGCTGTGTAAACTGGTGCCTCTTCATTCGTGGAATGGTTTTAACAACCCTTGTATGATGGTTGAGACTGTGGGGCGCCCCGTTGAAGCAAGAAATAGTCAATTCAGTTCTAGGCTGGAAGGTGTGGACGAGGGAAATTTTGATGCTTTGGATGCCAGGTTGTCCAAGTCTGCTATGAGGTATTCTCGGAGGGTGTATTCTGATTTGGGGTTCAGCAGCAACTTGATGGACTTGATGGCTACCACTGAGGAGCCTGAATTTCTAAGAGATGCTGATGGGGTGGAGCATAGTTCTAAATCGGCTGAACAAGTTTCTAGCTCCCGGTTTGGCAGTGGAAGATATTCCATAAGAGGGAGGAACCTATACCGGCCATGTGGCAGTGACAAGGACGCGTTTGACTTGAGTAAAGGCCAGATGGAGACTACTTCAAAACGGGATGGGATTTCTGATTCAAATTCGAAGAATTTGAATTCTCTGGTTGCTGAGGTTGTGTAG 1494 0.4906 MGYLYPSCRAESAVSTSNSVSSSKATKEKEKEKSSIKIQEFQYSDLEAATNGFSDRKLLGKGSHGYVYKAVVRGRPVAVKRPSRPHHHGVVPRPVSSSAPLEITNEVDNEIDILSKIQSPRLVNLVGFTNDSRDRLLVVEFMSNGTLYDVLHSSPRPPNWGRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRSYNARLGDFGLALRGHVDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKTDVFSFGILLLEIISGRKAIDISYSPPSIVDWAIPLIKKGKLLAVYDPRIAPPKDPLVRKQLAVIAAKCVRSCRERRPSMKDVVTWLCGLCKLVPLHSWNGFNNPCMMVETVGRPVEARNSQFSSRLEGVDEGNFDALDARLSKSAMRYSRRVYSDLGFSSNLMDLMATTEEPEFLRDADGVEHSSKSAEQVSSSRFGSGRYSIRGRNLYRPCGSDKDAFDLSKGQMETTSKRDGISDSNSKNLNSLVAEVV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02905 497 SMART serkin_6 53 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02905 497 Gene3D Transferase(Phosphotransferase) domain 1 142 340 - -
Spst2g02905 497 FunFam Serine/threonine-protein kinase-like protein 142 345 - -
Spst2g02905 497 MobiDBLite consensus disorder prediction 469 486 - -
Spst2g02905 497 PANTHER OS01G0253100 PROTEIN 16 334 - -
Spst2g02905 497 Pfam Protein tyrosine and serine/threonine kinase 57 330 IPR001245 GO:0004672|GO:0006468
Spst2g02905 497 Gene3D Phosphorylase Kinase; domain 1 23 141 - -
Spst2g02905 497 MobiDBLite consensus disorder prediction 1 34 - -
Spst2g02905 497 ProSitePatterns Protein kinases ATP-binding region signature. 59 80 IPR017441 GO:0005524
Spst2g02905 497 SUPERFAMILY Protein kinase-like (PK-like) 34 332 IPR011009 -
Spst2g02905 497 FunFam Serine/threonine-protein kinase-like protein At1g28390 21 141 - -
Spst2g02905 497 ProSiteProfiles Protein kinase domain profile. 53 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02905 497 MobiDBLite consensus disorder prediction 465 486 - -
Spst2g02905 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02905 Spst-Chr2 28824838 28826331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02905 41 332 Receptor kinase-like Gene Family AT3G59420 44.966 2.95e-75 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Spst2g02905 PK_Tyr_Ser-Thr 2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02905 - - vum:124832395 910.983