Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02896 ATGGAGAAGTACCTCAGAGAAAACTTCAGCGTCCAGCCGAAGAACCCTTCCGAGTCCGCCCTCCGCCGATGGAGATCCGCCGTATCCGTCGTCAAAAATCCCCGTCGACGCTTCCGCATGGTCGCCAATCTCGCCCAACGCGCCGACGCAGAAAACAAGCGTAGGAAGCTCCAGGAAAAAATAAGGGTGGCTCTCTATGTTCAAAAAGCAGCTTTGCATTTTATTAACGCTGGGAACCGTGGTATTGGTGACCGCATTGGCAGAGGTGGAGTTGGTCAGGTGGGCGACGGGGTTGGCCGCGGTGATGGTGGTTCTGGTGGTTACATGCTCTCAAACGAGACTCAGGAAGCAGGCTTCGGAATTGAGCCCGACGAATTAGCCTCCATTGTCCGATCCCATGACAACAAATGTTTAGAACTTCATGAAGGAGTGGAAGGAATAGCAAGGGCTGTTCGTGTGTCCTTGCATGAGGGCGTTATTTCAGTTGATGTGGAGCATAGACAAAATATCTATGGTTTTAACCGCCACGCCGAGAAGGCCCCTAGAAGCTTTTGGATGTTCGTTTGGGATGCAATGCAGGACTTAACTCTAATCATCCTTATGGCATGTTCTTTGGTCTCAGTAGGTGTTGGAATCTTAACTGAAGGTTGGCCAAAAGGTATGTACGATGGAGTGGGAATCATACTATCTATCCTTTTAGTGGTCTTTGTCACTTCAATTAGTGACTATAAACAGTCTTTGCAATTTAAGGACTTGGATAAAGAAAAGAAAAATGTCAGCATTCAAGTTACAAGAGACGGTAGAAGGCAAAAGGTTTCAATTCATGATCTAGTGGTAGGAGACATAGTCCATCTTTCAATAGGAGACATAGTTCCTGCAGATGGGTTATGGATATCTGGTTTCGGATTATTAATAGACGAGTCAAGTCTATCAGGTGAGAGCGAGGCTGTGAATATTGACGGCAGGAAGCCTTTTCTTCTATCTGGGACCACAGTGCAAGATGGGTATGCTAAGATGCTGATCACATCCGTTGGTGTGAGAACGGAATGGGGAAGATTGATGGATACTCTGAACGAGGGAGGAGATGATGAGACACCACTTCAGGTCAAACTAAATGGAGTTGCTACCATTATTGGAAAGATAGGCTTGGGTTTTGCCCTGCTCACATTCATGGTTCTAACGAGCAGGTTTTTGTGGAGTAAAATAGCTCAGCATGAGATTACAAAATGGTCCCTAAATGATGCATCCCAACTTCTCAATTTCTTTGCCACTGCTGTCATTATAATAGTTGTGGCAGTTCCTGAGGGGCTTCCTTTGGCAGTAACACTAAGCCTTGCATTTGCCATGAAGAAATTGATGAATGACAAGGCACTAGTCAGGCATCTCTCCGCATGCGAGACCATGGGTTCAGCAAGTTGTATTTGCACTGATAAAACGGGGACCTTGACTACAAATCACATGGTTGTAGACAAAATATGGATTTGCGAACAAACTAAGGTCATTAAAAGCGGCCCAGGTGAAAATGTGTTGAAGTCCTCAATTTCTGAACACACATTTGATCTTCTTTTGCAATCCATATTCCAGGATACTGCCTCAGAGATAGTCAAAGGGCTGGATGGAAAGAACAAGATCTTGGGTTCTCCCACAGAATCGGCACTGTTGGAATTCGGCTTGCTTTTGGGAGGTGATTCCAAGTTTTATAACAACAAGTATAAAATCGTGAAGGTTGAACCTTTCAATTCAATCAGAAAAAAGATGTCACTGCTGGTGGCTCTTCCCGGTGGCACCGACAAGTATCGAGCATTTTGCAAAGGAGCATCTGAACTAATTGTGAAAATGTGCGACAAAGTTGTCAACGCAGACGGCGAAGTGGTCCATTTGAACGAACAACAAAAAATTAGCATCACAGAAGTTATCAACGGTTTTGCTTCTGAGGCTCTGAGAACACTCTGCATTGCCTTCAAGGACATTGAAGGATCTTCTAAACGTGATTGTATTCCTGAGGACAAGTACACGTTGATAGCTATTGTTGGGATAAAGGATCCAGTGAGGCCTGGAGTAAAAGAAGCTGTCAAGACTTGTTTAGAAGCTGGCATTGTCGTTAGAATGGTGACTGGTGACAACATAAATACCGCTAAAGCAATAGCTAGAGAATGCGGCATATTGACAGATGGAATCGCGATAGAGGGACCGGATTTCCGGAACAAGTCTCCGCAAGAATTGGAAAAGATTATACCGAAAATACAGGTAATGGCCCGATCCTTGCCTCTTGACAAGCACAGCTTAGTGAGCCATTTGAGGGAGAATTTTAATGAGGTTGTGGCAGTAACTGGTGATGGGACCAATGATGCCCCAGCGTTGCATGAGGCTGATATTGGACTTGCTATGGGCATTGCAGGGACAGAGGTTGCAAAAGAGAACGCGGATGTGATTGTAATGGATGATAACTTCTCAACCATAGTGAATGTTGCCAGATGGGGTCGTGCTGTTTATATTAATATACAAAAGTTTGTCCAGTTCCAGTTAACCGTTAATGTTGTAGCTCTCGTGCTGAATTTTATTTCAGCATGCGTGTCAGGCTCTGCTCCTCTTAGTGCTGTTCAAATGCTTTGGGTAAACATGATCATGGACACTCTCGGCGCGTTGGCACTGGCTACAGAACCTCCTCATGATGGGTTGATGAAGAGGCCACCTATTGGAAAGAACGCCAAATTCATCACCAGGGTCATGTGGAGGAACATAATTGGTCAGAGCATCTATCAAATCATCGTCCTTCTGGTTCTCAAATTTCGTGGGGAACAGATTCTCAAGCTCAATGGACCTGATGATACTACCTTTCTTCTGAATACCGTCATATTCAACACCTTTGTATTTTGTCAGGTGTTCAACGAGATAAACAGCCGTGACATGGAGAAGATAAATGTTTTTGAAGGCATGTTAAGCAGCTGGGTTTTCGTGATGGTGATGGGTGTGACGATATGCTTTCAAGCCTTGATAGTTCAATATCTGGGGGCTTTTGCTCAAACGGTTCCACTGAGCCCGGAATTGTGGTTAGCAAGCGTGATGATTGGTGCGGTAAGTTTAGTTGTAGCTGTTCTCCTGAAGTGCATTCCAGTTCCATCGAGTACCTACACCGCCACCAATCATGATGGTTACGAGCAGCTCCCCAGTGGCCCTGATCTGGCATGA 3189 0.4509 MEKYLRENFSVQPKNPSESALRRWRSAVSVVKNPRRRFRMVANLAQRADAENKRRKLQEKIRVALYVQKAALHFINAGNRGIGDRIGRGGVGQVGDGVGRGDGGSGGYMLSNETQEAGFGIEPDELASIVRSHDNKCLELHEGVEGIARAVRVSLHEGVISVDVEHRQNIYGFNRHAEKAPRSFWMFVWDAMQDLTLIILMACSLVSVGVGILTEGWPKGMYDGVGIILSILLVVFVTSISDYKQSLQFKDLDKEKKNVSIQVTRDGRRQKVSIHDLVVGDIVHLSIGDIVPADGLWISGFGLLIDESSLSGESEAVNIDGRKPFLLSGTTVQDGYAKMLITSVGVRTEWGRLMDTLNEGGDDETPLQVKLNGVATIIGKIGLGFALLTFMVLTSRFLWSKIAQHEITKWSLNDASQLLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVDKIWICEQTKVIKSGPGENVLKSSISEHTFDLLLQSIFQDTASEIVKGLDGKNKILGSPTESALLEFGLLLGGDSKFYNNKYKIVKVEPFNSIRKKMSLLVALPGGTDKYRAFCKGASELIVKMCDKVVNADGEVVHLNEQQKISITEVINGFASEALRTLCIAFKDIEGSSKRDCIPEDKYTLIAIVGIKDPVRPGVKEAVKTCLEAGIVVRMVTGDNINTAKAIARECGILTDGIAIEGPDFRNKSPQELEKIIPKIQVMARSLPLDKHSLVSHLRENFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIVMDDNFSTIVNVARWGRAVYINIQKFVQFQLTVNVVALVLNFISACVSGSAPLSAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPIGKNAKFITRVMWRNIIGQSIYQIIVLLVLKFRGEQILKLNGPDDTTFLLNTVIFNTFVFCQVFNEINSRDMEKINVFEGMLSSWVFVMVMGVTICFQALIVQYLGAFAQTVPLSPELWLASVMIGAVSLVVAVLLKCIPVPSSTYTATNHDGYEQLPSGPDLA 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02896 1062 Gene3D - 158 358 - -
Spst2g02896 1062 NCBIfam calcium-translocating P-type ATPase, PMCA-type 136 1039 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Spst2g02896 1062 PRINTS H+-transporting ATPase (proton pump) signature 777 793 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst2g02896 1062 PRINTS H+-transporting ATPase (proton pump) signature 809 834 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst2g02896 1062 PRINTS H+-transporting ATPase (proton pump) signature 635 653 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst2g02896 1062 NCBIfam HAD-IC family P-type ATPase 743 860 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst2g02896 1062 NCBIfam HAD-IC family P-type ATPase 572 723 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst2g02896 1062 NCBIfam HAD-IC family P-type ATPase 227 499 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst2g02896 1062 Pfam haloacid dehalogenase-like hydrolase 473 791 - -
Spst2g02896 1062 SFLD C1.7: P-type atpase like 457 829 - -
Spst2g02896 1062 Gene3D - 190 1037 - -
Spst2g02896 1062 Pfam E1-E2 ATPase 260 453 - -
Spst2g02896 1062 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Spst2g02896 1062 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 481 687 IPR023299 GO:0000166
Spst2g02896 1062 Pfam Cation transporting ATPase, C-terminus 862 1036 IPR006068 -
Spst2g02896 1062 Coils Coil 40 60 - -
Spst2g02896 1062 PRINTS P-type cation-transporting ATPase superfamily signature 801 813 - -
Spst2g02896 1062 PRINTS P-type cation-transporting ATPase superfamily signature 777 796 - -
Spst2g02896 1062 PRINTS P-type cation-transporting ATPase superfamily signature 306 320 - -
Spst2g02896 1062 PRINTS P-type cation-transporting ATPase superfamily signature 475 489 - -
Spst2g02896 1062 PRINTS P-type cation-transporting ATPase superfamily signature 675 686 - -
Spst2g02896 1062 PRINTS P-type cation-transporting ATPase superfamily signature 697 707 - -
Spst2g02896 1062 Gene3D - 16 76 - -
Spst2g02896 1062 FunFam Calcium-transporting ATPase 665 822 - -
Spst2g02896 1062 FunFam Calcium-transporting ATPase 237 358 - -
Spst2g02896 1062 SFLD p-type atpase 457 829 IPR044492 -
Spst2g02896 1062 Gene3D - 472 822 IPR023214 -
Spst2g02896 1062 SUPERFAMILY Calcium ATPase, transduction domain A 260 356 IPR008250 -
Spst2g02896 1062 FunFam Calcium-transporting ATPase 16 76 - -
Spst2g02896 1062 SUPERFAMILY HAD-like 474 882 IPR036412 -
Spst2g02896 1062 SUPERFAMILY Calcium ATPase, transmembrane domain M 142 1038 IPR023298 -
Spst2g02896 1062 CDD P-type_ATPase_Ca_PMCA-like 164 910 - -
Spst2g02896 1062 Pfam Cation transporter/ATPase, N-terminus 142 207 IPR004014 -
Spst2g02896 1062 Gene3D - 485 682 IPR023299 GO:0000166
Spst2g02896 1062 ProSitePatterns E1-E2 ATPases phosphorylation site. 477 483 IPR018303 -
Spst2g02896 1062 FunFam Calcium-transporting ATPase 485 682 - -
Spst2g02896 1062 SMART Cation_ATPase_N_a_2 138 212 IPR004014 -
Spst2g02896 1062 PANTHER CATION TRANSPORTING ATPASE 114 1039 - -
Spst2g02896 1062 FunFam Calcium-transporting ATPase 794 1041 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02896 Spst-Chr2 28765253 28771430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02896 57 1059 Primary Pumps ATPases AT3G57330 67.829 0.0 1374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02896 K01537 - gmx:100805063 1805.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02896 2 28765253 28771430 Spst2g02896 2 28765253 28771430 ECH