Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02895 ATGGCGGGAACAAGAAAGAGAAAGAGCTGTCACAGAGAGGAGACAAGGGGAGCACACAAGCCAATAACTATGGAACATAGAAGAAGTGAAGAAGAAGAAGAAGCAATACTCAGAGAAGAAGTGAAGAAGAAGATAACAGAAGAGAAAAGAGAAATGGAAGAGGGATGTTCGATGTGCAAGCAGAGGGCGGCGATAGTGTGCGACTCCGACCAGGCAAAGTTATGTTGGGACTGCGACGAGAAGGTTCACAGCGCCAATTTCTTGGTGGCTAAACATTGGCGTGTCGGTCTGTGTGTTTCATGCCGTTCCCGCACCCCCTGGAAAGCCTCCGGCGAAAAACTCACACCCACCGTCGCCTTTTGTCAATCTTGTGTCGCCCATGCAGATTCCATGTGGCACTGGTTGCTCAACAATATTCACCAATATCGTCCTTGCGCGAACCCTCGCAACAACAATGGTGCAGAAAGGGAGAATGAATCCGCTTCTGCCTCTTGGCCATCCAACTCTTTCTGCATCGATTCCCATGATGAGACAGCGTGTTCTTCTTCCTCGGCCATGGTTATCGAAGACGCTACATTGCCCAACAACGACTCATCCTCTGTGACCTTATTGAAGATGCAAGGACATGATAAAAGAAAGTGA 642 0.4875 MAGTRKRKSCHREETRGAHKPITMEHRRSEEEEEAILREEVKKKITEEKREMEEGCSMCKQRAAIVCDSDQAKLCWDCDEKVHSANFLVAKHWRVGLCVSCRSRTPWKASGEKLTPTVAFCQSCVAHADSMWHWLLNNIHQYRPCANPRNNNGAERENESASASWPSNSFCIDSHDETACSSSSAMVIEDATLPNNDSSSVTLLKMQGHDKRK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02895 213 MobiDBLite consensus disorder prediction 1 34 - -
Spst2g02895 213 SMART bboxneu5 51 97 IPR000315 GO:0008270
Spst2g02895 213 MobiDBLite consensus disorder prediction 194 213 - -
Spst2g02895 213 CDD Bbox1_BBX-like 56 97 - -
Spst2g02895 213 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 55 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02895 Spst-Chr2 28763188 28765099 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02895 56 126 C2C2-CO-like Transcription Factor Family AT5G54470 63.380 6.33e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02895 - - gmx:102660179 151.754