Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02892 ATGGAGCATTTTGCCATGTTCTGGTCTGGATGGTTTCTTAAATGTGTTGTGTCCAAAGCCTCTCATTGTAATGCTGCACCGTTAGAGTTGGTCTCGATCGACAACGCTAACAAAACCATCTTGATTACAATCCACTTGTTACCATGCACCAAGCTCTCTGAAACGGTGACTCCTGTCTTTTTTTTATGGGATTCCGGAAAATGGAAGGAGAAAAGAAGGAAATGGATATTTGGAAGGCTAAAGAGCAAGAGATTACCTTCAATTACAGCTCCACTTGCATCAAAAGAGATAGCACTAAGCGAAGCAGAGGAAGAACAAAGCAAGCGTGCTTTAACAGTGGCCATTGCTTCAGCAGCTGCTGTTACTCCTGCTCATGCTGCTGCGGAGGTTGTTCGCCTCACCGGGGTCTCACAATCTGCCCTTCAACGCAAAGAACAGGCAGAAGAATATGAACCTCTTAGTAATGCTGCTCCTCAATCCACATACCAGTGCAAGAGGGACGTTAACGAATCTGCTGCAGTCATCAAAATTCAAACTGCATTCAGGGGTTTTCTAGCAAGGAAGGCTTTGAGGGCATTGAAGGGAATAGTGAAACTTCAAGCTATCATCCGAGGCAGAGCAGTAAGACGCCAAGCTATGAGTACTCTTAAGTGCTTGCAGTCCATTGTGAGTATCCAGTCACAGGTCTGTGCAAGGAGGCTCCTAATGGTCGAAGGGAGATGTGATTACACTGAAAATGAAGAGATGCAAGATTCTAAAGACAAGATAATTAGGATGGACTCAAACAGTGAAAGAAAGTGTGATGAAAGCACTCTATTGAAGGAAGAGGTAGACACCTCTTGCAAAGAAACAGTTCTCAAGAAAGAAAGAATAAAAGAATACTCATTTCACCATAGAAGGTCAGCAGAGTCAGAAAGAAGTAGAGTAAATGGAAGATGGAGATACTGGCTAGAGCAGTGGGTAGATACACAACTTTCGAAGAGTAAAGAACTTGAAGATTTAGACTCAGTTTTTAGCTCACATTCTAGAGGTGGGGAGGAATATGGAGGCAGACAACTTAAGGTGAGAAGTATTAACAGGCAAAATCCAGTTGAAGGGTTAGATTCTCCAATACTTGGTTCAAGAAGATCTTTTCCTCATAGAAGGCAGTGTTCAGTGGGAGAAGACCAGTCATTTTCAAGCTCTCCTGCAACTCCAGCATACATGGCTGCAACAGAATCAGCAAGAGCAAAAGCAAGATCAACAAGCTCCCCAAAAATAAGGACAGGGGGGAATGTGGACATCAACTCTGATAGCTATTCACCATGCAAGAAAAAGCTATCCATTGCATCTTCTATTAACAGTGAAGTGCTTAGTAATGGTAGGATGGCCAAGCTCAGTGGTAACCAGCAAAGATCTCCAAGCTTTAAGGGCCTTTCAGTGCCAATAAAATCTAGTCGAACTATCAAGGATCTCAGTATCAATTCAGATTGCTCACTGCCTAATTGGGTCCCACAAGGTTCCTTCAAATGA 1512 0.4312 MEHFAMFWSGWFLKCVVSKASHCNAAPLELVSIDNANKTILITIHLLPCTKLSETVTPVFFLWDSGKWKEKRRKWIFGRLKSKRLPSITAPLASKEIALSEAEEEQSKRALTVAIASAAAVTPAHAAAEVVRLTGVSQSALQRKEQAEEYEPLSNAAPQSTYQCKRDVNESAAVIKIQTAFRGFLARKALRALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVSIQSQVCARRLLMVEGRCDYTENEEMQDSKDKIIRMDSNSERKCDESTLLKEEVDTSCKETVLKKERIKEYSFHHRRSAESERSRVNGRWRYWLEQWVDTQLSKSKELEDLDSVFSSHSRGGEEYGGRQLKVRSINRQNPVEGLDSPILGSRRSFPHRRQCSVGEDQSFSSSPATPAYMAATESARAKARSTSSPKIRTGGNVDINSDSYSPCKKKLSIASSINSEVLSNGRMAKLSGNQQRSPSFKGLSVPIKSSRTIKDLSINSDCSLPNWVPQGSFK 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02892 503 SMART iq_5 169 191 IPR000048 GO:0005515
Spst2g02892 503 Pfam IQ calmodulin-binding motif 172 191 IPR000048 GO:0005515
Spst2g02892 503 ProSiteProfiles IQ motif profile. 170 198 IPR000048 GO:0005515
Spst2g02892 503 MobiDBLite consensus disorder prediction 409 423 - -
Spst2g02892 503 Gene3D - 169 220 - -
Spst2g02892 503 ProSiteProfiles IQ motif profile. 194 221 IPR000048 GO:0005515
Spst2g02892 503 PANTHER IQ-DOMAIN 5-RELATED 69 443 - -
Spst2g02892 503 MobiDBLite consensus disorder prediction 386 423 - -
Spst2g02892 503 Pfam Protein of unknown function (DUF4005) 388 470 IPR025064 -
Spst2g02892 503 MobiDBLite consensus disorder prediction 386 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02892 Spst-Chr2 28732514 28736586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02892 69 503 IQD Protein Family AT5G13460 45.591 2.22e-98 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02892 - - gmx:100800192 696.041