Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02864 ATGCCCGAGGTCGAAGAGAATGATCTTCAGCCATTCTTTGTTCTTCATAAAGCTTCGTCCCGGAGAAAAGATAGAACACCAACTGCACAAGAAAAATTGTGCAAGAGAAATGAGTTATCTACATCACCACAAAGTGCAAAGAAGCTGGGAGGAAGTAGGACGGAAGAATGTGATCACCGTTTGCTTCAGCAACTGCAGATTGAAGCTTTTGACATTGTTTGGGCAAAGATTGAATCTACCATTAAGGATGTTTTAAGAGATCTCAAAGCCAGTGTATTCAATGATATACAACAATGGGTTTTGGAGTGCTGCAACGCTACTAAGTTGCTCGGAGAACCTACTATTGCTGAAGCAACTCGGTCTTTTCCTCTCCTAAGTAACACTACTCCTGGGCAGCTGTTCACTGCTTTCGTTGTTACCAGAAACATAGAGTTCGTTGATGATGTCTTGACATTTGAAGAGCTTGGCCATTTCTTGAAATCCCATGGATGCCATGTGGCTAAACTTTCATCACTAGAGTTTTCATTGAAAAATGGGATTGCTGGTTGCTTGAAAGCTCTATTGCGAGAGTTTCTAGGATGTGCCATCGACGTGCCAATTATCCTCATATTTGGAGTTGCAACGACAGTGGATACCCCTAGAAACGTGCTCCCATCACATGCTCTTGAGCGCTTGTGTCCGTCTAGTTTTATGCTTGGAACACCTGCAGAGAGAATGGATGCAATAGTTGAGGCTGTTTTTGTGAAACATTGCACCATGTTTAGTATTGGTCATAAAGTGGCAGCCTTCCTAAGAAATTACTTCATCAACCAGGATGGGACAATAACATCCTTTATTAGAGCTTTGAAGGTAGCTTGCTTATTGCATTTCTCAATGGAACCTCTAAGTCTCCTACATGGGCGAACAATAGCTGAAGATCAGAAAGAAGGAAAATCTGCACTATCACCTGGGACTCTATTGAAATACATAGATGAACTTCCATTGTATACAAGGAATCAAATGGTTGATCATCACACTAAAAAAAGCATGGCCGAGGGTTTGTCAGAACTGGTGACAGTACAAAAGCTATGGAGCACTACAGTTCTTTGCCTATATGAAGCTGGAAAATATGGCAGAGTGCAACTGTTGGATTTGTTTTGCGAAGCTCTCAATCAAGATTTGAACCTATCAAGCGATTCTGATCATCATGTGAGGGATGAAAGATATTGTGGTTTGTCTTCGACAAGTGATCCCCGTCCACAATATTCCATCATGCAAAGCAGTGGTTTTATTGGCCAGATAGTACGCAAAGTCAGGGATCTTCCCACAGGAATGCTATATCATTTGATTGAGAGTTGGGAAAGACTTACTGCAGATATTTCAGAGTATAACACTCACACAGCTCAATTTCGTGGTCTATTTAGTTTAGGAATTTTGGAAACACTGGTGGCATGCCAGTGTTTAGACAAATCATTGATTCATCATATAATTTGTGGGATTGGCAAGATTCACGAGAAACTGAAAGTGTTGCAATCTTCAGTAAGATGTGAAGACGGAAAGAGTTCACGCAAGAGTTCCAAGGACAATCCCAAGAGATTTGCGTCCAGGATTTCAGTAAGCACTGATAACGATGCGAGAATATTAAATTCACAAGCAATCGCATTTTTAGACTGGCTAGTTGGGAATTTTTTGAAGCCCATTGAAGGCATGCCTTTCCACGAAATTTTATGCTTCAAGAATGTTGAGAAGCTTCAATTGGTTTTGATTGGAGATCCAAGAAGAAGAATTCAAGTTGACCTGTTGGATTTCCATATGATTTTAAGGTGTAGCTGCTGCAGCAAGAGTGGGAATGCCCTATTGCCATCCAGGCATGATTCATCAATAATGTATTCTCTGGCTCAAGAGCATGGAGATCTTATCAATCTTCATGACTGGTTCCAGTCTTTCAGAACAATTGTTCTTCAACATAAAAATAAACGGAAACAAAACACAAAGCAATCGCCCCAACCAAAGAAGAGAAAAGATACAAATGGATCTGCAGACCAAAACGAAGCATCAATTCAAGCACGCTTTTGTAGGGCAGTCACAGAGCTGCAGATCACTGGACTGGTTAGAATGCCCAGCAAGAGACGCCCAGATTTTGCGCAAAGAATAGCCTTTGGACTTTAA 2148 0.4115 MPEVEENDLQPFFVLHKASSRRKDRTPTAQEKLCKRNELSTSPQSAKKLGGSRTEECDHRLLQQLQIEAFDIVWAKIESTIKDVLRDLKASVFNDIQQWVLECCNATKLLGEPTIAEATRSFPLLSNTTPGQLFTAFVVTRNIEFVDDVLTFEELGHFLKSHGCHVAKLSSLEFSLKNGIAGCLKALLREFLGCAIDVPIILIFGVATTVDTPRNVLPSHALERLCPSSFMLGTPAERMDAIVEAVFVKHCTMFSIGHKVAAFLRNYFINQDGTITSFIRALKVACLLHFSMEPLSLLHGRTIAEDQKEGKSALSPGTLLKYIDELPLYTRNQMVDHHTKKSMAEGLSELVTVQKLWSTTVLCLYEAGKYGRVQLLDLFCEALNQDLNLSSDSDHHVRDERYCGLSSTSDPRPQYSIMQSSGFIGQIVRKVRDLPTGMLYHLIESWERLTADISEYNTHTAQFRGLFSLGILETLVACQCLDKSLIHHIICGIGKIHEKLKVLQSSVRCEDGKSSRKSSKDNPKRFASRISVSTDNDARILNSQAIAFLDWLVGNFLKPIEGMPFHEILCFKNVEKLQLVLIGDPRRRIQVDLLDFHMILRCSCCSKSGNALLPSRHDSSIMYSLAQEHGDLINLHDWFQSFRTIVLQHKNKRKQNTKQSPQPKKRKDTNGSADQNEASIQARFCRAVTELQITGLVRMPSKRRPDFAQRIAFGL 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02864 715 CDD Orc3 68 298 - -
Spst2g02864 715 MobiDBLite consensus disorder prediction 650 676 - -
Spst2g02864 715 MobiDBLite consensus disorder prediction 33 49 - -
Spst2g02864 715 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 197 714 IPR020795 GO:0003677|GO:0005664|GO:0006260
Spst2g02864 715 Pfam Origin recognition complex winged helix C-terminal 586 713 IPR040855 -
Spst2g02864 715 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 186 298 IPR045667 -
Spst2g02864 715 CDD Orc3 564 713 - -
Spst2g02864 715 MobiDBLite consensus disorder prediction 18 32 - -
Spst2g02864 715 MobiDBLite consensus disorder prediction 18 53 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02864 3 647 Core DNA Replication Machinery Family AT5G16690 39.398 6.53e-164 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02864 K02605 - gmx:100780646 1079.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02864 2 28448146 28459069 Spst2g02864 2 28448146 28459069 ECH