Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02861 ATGAACAACAGTGGTGGAGGAACTTTGATGGGTTTGAGCAATGGTTATTATGGGAGGTCGCCATTCACAGTGTCTCAGTGGCAGGAACTGGAGCACCAAGCTTTGATCTTCAAGTACATGCTTGCGGGTATTCCTGTGCCTCCTAATCTCGTGCTCCCTATTCAGAAGAGCTTCGATTCTTTCCCACATGCTTTCTTTCACCACCCCACATTGAGTTATTGTTCCTTCTATGGGAAGAAGGTGGACCCAGAGCCAGGACGATGCAGGAGGACTGATGGAAAAAAATGGAGGTGCTCCAAGGAAGCATACCCAGACTCCAAGTACTGCGAGCGTCACATGCACCGTGGTCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTATGACTCACTCTTCTTCAACTGTTACATCCCTCAATGTCACAGGTGGAAGTGGCAGCACTAGAACATTAAACTTCCAAAACCTTACTGCAAATGACTTTGGTAATCTCCAGGGTACTGATTCTGGAACTGACCCTACCAATTATCATCTACATTCCATTCCTTATGCGATCCCCAGTAAAAAACACAGGTATCTTCAAGGACTTAAATCTGAGCGTGGTGAACATATCTTATTTTCTGAAGCTTCAGGAAGCAACAAGGTTCCCCAAATGTTGTCACAGCTAGAAGACACATGGCCTTTGATGTCTACCAGAGTTGCCTCTTTTTCTACATCAAAATCAAGTAATGATTCCCTTTTGCATGGTGATTATCCCCAGCATTCGCTTTTATCTGGTGAATATGCATCAGGAGAACACCTGAAGGAGGAGGGTCACCCTCTTCGATCTTTTTTCAATGAATGGCCTAAAAGCAGGGATTCATGGTCTGGTCTGGAAGATGAGAGATCTAATCAAACAGCCTTCTCCACAACTCAACTCTCAATATCCATTCCTATGTCTTCTGATATCTCTGCAACGAGCTCTCAGTCCCCACATGGTGAGAGTGATATTCAATTTAGGTAA 1002 0.4471 MNNSGGGTLMGLSNGYYGRSPFTVSQWQELEHQALIFKYMLAGIPVPPNLVLPIQKSFDSFPHAFFHHPTLSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMTHSSSTVTSLNVTGGSGSTRTLNFQNLTANDFGNLQGTDSGTDPTNYHLHSIPYAIPSKKHRYLQGLKSERGEHILFSEASGSNKVPQMLSQLEDTWPLMSTRVASFSTSKSSNDSLLHGDYPQHSLLSGEYASGEHLKEEGHPLRSFFNEWPKSRDSWSGLEDERSNQTAFSTTQLSISIPMSSDISATSSQSPHGESDIQFR 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02861 333 MobiDBLite consensus disorder prediction 293 333 - -
Spst2g02861 333 MobiDBLite consensus disorder prediction 123 145 - -
Spst2g02861 333 MobiDBLite consensus disorder prediction 114 145 - -
Spst2g02861 333 ProSiteProfiles WRC domain profile. 82 126 IPR014977 -
Spst2g02861 333 Pfam WRC 83 125 IPR014977 -
Spst2g02861 333 SMART QLQ_2 20 56 IPR014978 GO:0005524|GO:0005634|GO:0006355
Spst2g02861 333 MobiDBLite consensus disorder prediction 288 333 - -
Spst2g02861 333 PANTHER GROWTH-REGULATING FACTOR 5 20 315 IPR031137 GO:0005634|GO:0006351|GO:0032502
Spst2g02861 333 Pfam QLQ 21 55 IPR014978 GO:0005524|GO:0005634|GO:0006355
Spst2g02861 333 ProSiteProfiles QLQ domain profile. 21 56 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02861 Spst-Chr2 28412301 28415452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02861 8 125 GRF Transcription Factor Family AT3G13960 59.836 5.45e-47 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Spst2g02861 WRC 1.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02861 - - gmx:100787567 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02861 2 28412301 28415452 Spst2g02861 2 28412301 28415452 ECH