Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02857 ATGTCAGGCTCCTCGCAGGTTGTTACATGCAAAGCTGCCATATGCTGGGGGTTAGGAGGACCTGTTACGGTGGAAGAGATAGAAGTTGATCCACCAAAGGCAACTGAAGTTCGAGTTAAGATGCTCACTGCCAGTATATGCCACACAGACATATTAAGCATTCATGGATTCCCAAATGTCAATTATCCGAAAGCACTTGGACACGAAGGAGTTGGGGTTGTGGAGAGTGTTGGTGATCAAGTGACAACCCTAAAAGAGGGAGATATGGTAATCCCAACATATATGGGGGAGTGTCAGACATGTGAGAATTGTGTTTCAGGAAAAACCAATTTATGTCTGACATATCCTGTAAGATTGACTGGTTTACTACCAGACAACACTTCAAGGATGTCCATCCGAGGACAGAGGCTATACCATGTTTTAAGTTGTGCCACATGGTCAGAATACATGGTTAGTAATGTCAATTACATTTTAAAAGTTGATCCAACCATTGATCCAGTCCATGCCAGTTTCATCTCATGTGGGTTTTCAACTGGCTTTGGAGCTGCTTGGAAGGAAGCCAAGGTGGAGAGTGGATCCTCTGTAGCTGTTCTTGGGCTTGGGGCTGTTGGATTAGGGGCTGTAAGTGGAGCCAAAAGTATGGGAGCAACTAAGATAATTGGTATTGACAAAAACGAGAAGAAGAGAGAAAAAGGAGAGGCTTTTGGAATGACCCACTTTATAAACCCTGGTGATTCTGCAAAGTCTGTTTCAGAATTGGTTAAGGAACTAAGTGGTGGATTGGGTGTGGATTATTCCTTTGAGTGCACTGGAATTGCCCCTCTACTTACTGAATCATTGGAAGCCACAAAAGTGGGAACGGGTAAAACAATAACAATTGGTTTAGGAATAGAACATGTTGTCTCAATTGGTGTTCTATCCATTTTGTTCGGCAGAACTTTGAAAGGTTCTGTTTTTGGGGGCCTAAAACCCATATCTGACCTGTCCACAGTAGCTAACAAATGCCAGAAAAAGGAATTCCCTTTTCAAGAACTATTTACTCATGAGGTCCCTTTGGAAGATATTAACCAAGCGTTTGAACTATTGAAAGATCCAAACTGTGTAAAAGTTATCATCAAGATTAGACCTTGA 1131 0.4218 MSGSSQVVTCKAAICWGLGGPVTVEEIEVDPPKATEVRVKMLTASICHTDILSIHGFPNVNYPKALGHEGVGVVESVGDQVTTLKEGDMVIPTYMGECQTCENCVSGKTNLCLTYPVRLTGLLPDNTSRMSIRGQRLYHVLSCATWSEYMVSNVNYILKVDPTIDPVHASFISCGFSTGFGAAWKEAKVESGSSVAVLGLGAVGLGAVSGAKSMGATKIIGIDKNEKKREKGEAFGMTHFINPGDSAKSVSELVKELSGGLGVDYSFECTGIAPLLTESLEATKVGTGKTITIGLGIEHVVSIGVLSILFGRTLKGSVFGGLKPISDLSTVANKCQKKEFPFQELFTHEVPLEDINQAFELLKDPNCVKVIIKIRP 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02857 376 Gene3D - 179 317 - -
Spst2g02857 376 CDD liver_alcohol_DH_like 8 373 - -
Spst2g02857 376 SMART PKS_ER_names_mod 17 372 IPR020843 GO:0016491
Spst2g02857 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Spst2g02857 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 336 IPR036291 -
Spst2g02857 376 SUPERFAMILY GroES-like 327 372 IPR011032 -
Spst2g02857 376 SUPERFAMILY GroES-like 5 190 IPR011032 -
Spst2g02857 376 Pfam Zinc-binding dehydrogenase 202 324 IPR013149 -
Spst2g02857 376 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 317 - -
Spst2g02857 376 Gene3D - 14 369 - -
Spst2g02857 376 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
Spst2g02857 376 Pfam Alcohol dehydrogenase GroES-like domain 35 159 IPR013154 -
Spst2g02857 376 PANTHER ALCOHOL DEHYDROGENASE 6 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02857 Spst-Chr2 28379803 28381702 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02857 35 362 Monolignol Biosynthesis Gene Families AT2G21730 28.614 5.73e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02857 K00121 - gmx:100798341 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02857 2 28379803 28381702 Spst2g02857 2 28379803 28381702 ECH