Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02856 ATGTCAAGCACCTCGCAGGTTCTTACATGTAAAGCTGCCATATGCTGGGGAATAGGACACCCGGTTACAGTGGAAGAGATAGAAGTTGACCCACCAAAAGCAACTGAAGTTCGAGTTAAGATGCTCACTGCCAGTATTTGCCACACAGACATATCAAGCATTCAAGGATTCCCATCTATCAATTTTCCTCTAGCACTTGGACACGAAGGAGTTGGGATTGTAGAGAGTGTCGGTGATCAAGTGACAACCTTTAAAGAGGGGGATATGGTAATCCCAACATATATAGGGGAGTGTCAAACATGTGAGAATTGTGTTTCAGGAAAAACCAATTTATGTCTGACATATCCTTTAAGATTGACTGGTTTACTACCAGACAACACTTCAAGGATGTCCATCCGAGGACAGAGGCTACACTATGTTTTAAGTTGTGCCACATGGTCAGAATACATGGTTAGTGATGTCAATTACATTTTAAAAGTTGATCCAACCATTGATCCAGTCCATGCCAGTTTCATCTCATGTGGGTTTTCAACTGGCTTTGGAGCTGTTTGGAAGGAAGCCAAGGTTGAAAGTGGATCCTCTGTAGCTGTTTTTGGTCTTGGGGCTGTTGGATTAGGGGCTGTAAGTGGAGCCAAAATCATGGGAGCAACTAAGATAATTGGAATTGACAAAAATGAGAAGAAGAGAGAAAAAGGAGAGGCTTGTGGAATGACTCACTTTATAAACCCTGGTGATTCTGCTAAATCTGTTTCAGAATTGGTGAAGGAACTAAGTGGTGGAATGGGTGTGGATTATTCCTTCGAGTGCACTGGAATTGCCCCTCTACTTACTGAATCATTGGAAGCTACAAAAGTGGAATTCCCTCTTCAAGAACTATTCACCCATGAGGTCCCTTTAGAAGATATTAACAAAGCATTTGAACTATTGAAAGATCCAAACTGTGTAAAAGTTGCCATCAAGATGTGA 966 0.4172 MSSTSQVLTCKAAICWGIGHPVTVEEIEVDPPKATEVRVKMLTASICHTDISSIQGFPSINFPLALGHEGVGIVESVGDQVTTFKEGDMVIPTYIGECQTCENCVSGKTNLCLTYPLRLTGLLPDNTSRMSIRGQRLHYVLSCATWSEYMVSDVNYILKVDPTIDPVHASFISCGFSTGFGAVWKEAKVESGSSVAVFGLGAVGLGAVSGAKIMGATKIIGIDKNEKKREKGEACGMTHFINPGDSAKSVSELVKELSGGMGVDYSFECTGIAPLLTESLEATKVEFPLQELFTHEVPLEDINKAFELLKDPNCVKVAIKM 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02856 321 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Spst2g02856 321 Gene3D - 179 284 - -
Spst2g02856 321 SMART PKS_ER_names_mod 19 319 IPR020843 GO:0016491
Spst2g02856 321 Pfam Zinc-binding dehydrogenase 202 284 IPR013149 -
Spst2g02856 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 285 IPR036291 -
Spst2g02856 321 Gene3D - 14 178 - -
Spst2g02856 321 PANTHER ALCOHOL DEHYDROGENASE 6 284 - -
Spst2g02856 321 SUPERFAMILY GroES-like 4 190 IPR011032 -
Spst2g02856 321 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
Spst2g02856 321 Pfam Alcohol dehydrogenase GroES-like domain 35 159 IPR013154 -
Spst2g02856 321 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02856 Spst-Chr2 28369181 28371121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02856 35 300 Monolignol Biosynthesis Gene Families AT2G21730 29.520 2.86e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02856 K00121 - gmx:100798341 532.332