Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02855 ATGGCTGCTGCTGACAACACCAACCCTCCTAAGGATTATTACAAAGTGCTGGAGGTTGATTATGATGCAACTGATGAAATTATCAAATTCAATTACCGAAGGCTCGCACTGAAATGGCATCCTGACAAACATGGAGGTGACAGTGCTGTTACTGCAAAATTTCAGGAGATAAATGAAGCTTACAATGTGTTAAGTGATCCTGCCAAGCGTTTGGACTATGATTTAACAGGGATATGCGAGATTGAAAAATATAGCTTGCAGGAATATCTTGCCAGATTTAAAGGCATGATTCTTACCTGCAATGGACTTGGTATCAATCAAACAGACAGATGGTCAACACAATTCATTGAAAATTTTGAATCCCTAGATAAATAA 375 0.384 MAAADNTNPPKDYYKVLEVDYDATDEIIKFNYRRLALKWHPDKHGGDSAVTAKFQEINEAYNVLSDPAKRLDYDLTGICEIEKYSLQEYLARFKGMILTCNGLGINQTDRWSTQFIENFESLDK 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02855 124 CDD DnaJ 12 66 IPR001623 -
Spst2g02855 124 ProSitePatterns Nt-dnaJ domain signature. 54 73 IPR018253 -
Spst2g02855 124 ProSiteProfiles dnaJ domain profile. 12 77 IPR001623 -
Spst2g02855 124 SUPERFAMILY Chaperone J-domain 9 98 IPR036869 -
Spst2g02855 124 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 108 - -
Spst2g02855 124 Pfam DnaJ domain 12 74 IPR001623 -
Spst2g02855 124 Gene3D DnaJ domain 2 93 IPR036869 -
Spst2g02855 124 FunFam Chaperone protein DNAj, putative 4 91 - -
Spst2g02855 124 PRINTS DnaJ domain signature 14 32 IPR001623 -
Spst2g02855 124 PRINTS DnaJ domain signature 49 69 IPR001623 -
Spst2g02855 124 PRINTS DnaJ domain signature 69 88 IPR001623 -
Spst2g02855 124 PRINTS DnaJ domain signature 32 47 IPR001623 -
Spst2g02855 124 SMART dnaj_3 11 69 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02855 Spst-Chr2 28351376 28354771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02855 3 74 C2H2 Transcription Factor Family AT1G74250 40.260 1.38e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02855 - - gmx:100305987 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02855 2 28351376 28354771 Spst2g02855 2 28351376 28354771 ECH