Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02834 ATGTCAGAAGCAGTTACTTCGCTACAAACTCAACACAACACCACTCACATTTTCAGATCAAAATTACCGGACATACCCCTCCCCAGCAACCTCCCCCTCCACACATACTGCTTCCTTAAACTCCCCGAAATCCCCCACCGCCCATGCCTCATCGCCTCCGCCAGAACCTACACCTACGCCGACACTTACCTCGCCTCGCGGAAGGTGGCCGCCGGCATGTCGAGGCTGGGAATCCAGAAGGGCGACGTCGTCATGATTCTCCTCTGCAACTCCCCAGAGTTCGTGTTCACCTTCATGGCGGCCTCCATGCTCGGCGCCGTCGCCACCACCGCCAACCCCTCCTTCACCCCCGCTGAAATTTCCAAGCAACTCGCCGTCTCCAACGCCAAACTCGTTGTCACCCTCTCGGCTCACGTCCACAAGCTCAACCAGCACGCGCACCGCCATTTCTTCAAAGTGGCCACCGTCGACTACCCGCCGGAGAATTGCGTGAGTTTCCCGGAGGGCGAGGAGAGTGAGGTTCCGGAGGTTGAGATATCGGCGGAGGACGCGGTGGCGATGCCGTTTTCGTCCGGGACGACGGGGCTGGCGAAGGGGGTGGTTCTGACGCACAAGAGTTTGGTGACGGGCGTGGCGCAACAGATGGAGGGAGAGAACCCGCACGTGTACCTGAAGGAAGAGGACGTTGTGCTTTGCGTGCTTCCTCTGTTTCACATATTCTCCATGCACAGTGTGATGATGTGCGCGCTGAGAGCGGGAAGTGCCATTCTGTTGATCGAGAAGTTTGAGATGAGGGCGATGCTGGAGGCGATAGAGCGGCACAGGGTGACGGTGGCGATAATGGTTCCGCCGTTGGTGGTGGCGCTGGCGAAGAACAAAGCGGTGGAGGAGTACGATTTGAGTTCGATACGGATGGTGATGTCAGGGGCTGCGCCGCTGGGGCAACAGGCAGAAGAGGCTCTGCGGAATAGGTTGCCCAACGCCATTGTTGGACAGGGGTATGGGATGACAGAGGGTGGTCCTGTGTTGGCCATGTGTTTGGGGTTTGCAAAGTATCCATTCCCGACCAAGTCAGGCTCATGCGGAACTGTTATCAGAAATGCAGAATTGAAGGTCATCCACCTTCAAACTTCCTTTCCTCTTCCCCGTAACCACCCTGGCGAGATTTGCATCCGTGGCCAACAGATCATGAAAGGATACCTGAATGACGAGAAGGCCACTGCAGCAACCATTGATGCAGATGGTTGGCTTCATACAGGTGATATTGGCTACGTGGATGATGATGATGAGATTTTCCTTGTTGACAGGGCCAAGGAACTCATCAAATTTAAAGCCTTCCAGGTGCCACCAGCAGAACTTGAAGACCTTCTTATGAGCCATCCCTCCATTGCAGATGCAGCTGTTGTTCCGCAAAACGACGATGCTGCGGGTGAAGTTCCAGTGGCTTTCGTGGTGAGCTATGATCTTACAGAAGAGGCTGTGAAGGATTTTATAGCTAAACGGGTCGTGTTCTACAAGAGACTGCACAAGGTTTATTTTGTTCAATCAATTCCCAAGTCTCACACTGGAAAGATATTAAGAAGAGAACTGAGAGCAAAACTGGCCCGCATTATTCACAACACCTAG 1626 0.5418 MSEAVTSLQTQHNTTHIFRSKLPDIPLPSNLPLHTYCFLKLPEIPHRPCLIASARTYTYADTYLASRKVAAGMSRLGIQKGDVVMILLCNSPEFVFTFMAASMLGAVATTANPSFTPAEISKQLAVSNAKLVVTLSAHVHKLNQHAHRHFFKVATVDYPPENCVSFPEGEESEVPEVEISAEDAVAMPFSSGTTGLAKGVVLTHKSLVTGVAQQMEGENPHVYLKEEDVVLCVLPLFHIFSMHSVMMCALRAGSAILLIEKFEMRAMLEAIERHRVTVAIMVPPLVVALAKNKAVEEYDLSSIRMVMSGAAPLGQQAEEALRNRLPNAIVGQGYGMTEGGPVLAMCLGFAKYPFPTKSGSCGTVIRNAELKVIHLQTSFPLPRNHPGEICIRGQQIMKGYLNDEKATAATIDADGWLHTGDIGYVDDDDEIFLVDRAKELIKFKAFQVPPAELEDLLMSHPSIADAAVVPQNDDAAGEVPVAFVVSYDLTEEAVKDFIAKRVVFYKRLHKVYFVQSIPKSHTGKILRRELRAKLARIIHNT 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02834 541 CDD 4CL 27 530 - -
Spst2g02834 541 Gene3D - 437 538 IPR045851 -
Spst2g02834 541 Gene3D - 8 436 IPR042099 -
Spst2g02834 541 FunFam 4-coumarate--CoA ligase 2 439 537 - -
Spst2g02834 541 Pfam AMP-binding enzyme 45 443 IPR000873 -
Spst2g02834 541 Pfam AMP-binding enzyme C-terminal domain 452 524 IPR025110 -
Spst2g02834 541 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Spst2g02834 541 FunFam Long-chain-fatty-acid--CoA ligase FadD 19 438 - -
Spst2g02834 541 SUPERFAMILY Acetyl-CoA synthetase-like 17 537 - -
Spst2g02834 541 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02834 Spst-Chr2 28221971 28224031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02834 9 469 Monolignol Biosynthesis Gene Families AT3G21240 60.341 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02834 K01904 - gmx:100790396 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02834 2 28221971 28224031 Spst2g02834 2 28221971 28224031 ECH