Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02828 ATGAAATGCAGTGATGTGATTTGCAGAGGAGGAGGAGAAGAAGGAATGGCTTACATGTGTGCAGACAGTGGGAACCTCATGGCCATTGCGCAGCAAGTTATCAAGCAGAAGCAGCAACAAGAACAACAGCAACAGAAGCAGCAGCAGCAACACCATCTTAATCCTCTCTCTCTCCACCCAATTCCATGGAACAACACTCCCCCTCTAGGCTACCCTCTACCTCCCACAGACTTCCCCGACCCCTTCCAACCCGATCCCCCATTCCACTTCCCGGACCCTCACTCAGCCCCTCCCCCCGCCCCCTTCCGCTTCTCCGATTTCGACTCCGACGACTGGATGGACTCCCTCATCGCCGCCGCCGACACCCCCTCCTGGCACACCAATGCCGATTTCCCCTTCCCATCCGATCTCAACCGCCTCATCTTTCCCTCCTCCGACGCCGCAACCGCAACCGCCACCGCCTCACTCCCCCTCCAACCAACCCCTCCCCCGGCGCCGCAGGACCCCGTCAACACCACCCTCTCCTCCGAAGCCGACTCCGCCCACCCGCTCCTCAAAGCCCTAACCGAGTGCGCCTCCCTGGCGGAGTCCGAACCGGATCAGGCAGCGGAATCCCTAACGCGTCTCAGAAAATCCGTATCCCAACACGGGAACCCCACTCAGCGTGTGGCCTTCTACTTCTGCGAAGCCCTCGCCCGTAAAATATGGGCCGAGAAAGAGAAGGCCGAGCCCAACACCGGAACGACTTCGGAGGAGTTAACACTCGCTTACAAAGCCCTCAACGACGCTTGCCCTTACTCCAAGTTCGCACACTTAACCGCCAACCAGGCCATCTTAGAAGCCACCGAGGGCGCCTCCAACATCCACATCCTCGACTTTGGCATCGTCCAAGGGATTCAATGGGCCGCGCTCTTGCAGGCCTTCGCCACTCGCTCTTCCGGAAAGCCCAACAAGATCAAAATCTCCGGGATTCCCGCCATCGCTCTCGGCGTCTCGCCCGGCCCATCTCTCTCCGCCACCGGCAACCGCCTCTCCGAGTTCGCCAAACTCCTCGACTTGAACTTCGAGTTCGCGCCTATTCTCACTCCCATTCACGACCTCGACCGCAACAGCTTTTGCATTCACCCAGACGAGGCCTTGGCCGTCAACTTCATGCTCCAGTTGTATAACCTCTTGGATGAGCCTCCAACCGTCGTCGACACCGCCCTCAGGTTGGCCAAATCTCTCAACCCCAAAATCGTCACCCTTGGTGAGTATGAAGCCAGCTTGACACGCGTCGCCTTTCTCAACCGCTTCAAGACTGCGTTTAACTACTTCTCTGCTCTCTTCGAGTCCCTCGAGCCCAACTTGCCCGCAGACTCGCCGGAGAGGTATCAGGTCGAGAGTCTTCTCCTCGGACGCCGAATCGCCGCGGTCGTTGGCCCTGGGCCCGTTAGGGAGAGCATGGAGGCAATGGAGCAGTGGAGGGTTCTCATGGAGCGTGCTGGCTTTGAGTCCGTCAGTCTCAGCCATTATGCAATTAGTCAAGCCAAGATACTTCTTTGGAATTACAGTTACAGTTCTCTGTTTTCGCTGGTTGAATCTAAACCACCGGGGTTCTTGTCTCTGGCTTGGAAAGATGTTCCTCTCCTGACTGTCTCCTCGTGGCGTTAA 1653 0.5771 MKCSDVICRGGGEEGMAYMCADSGNLMAIAQQVIKQKQQQEQQQQKQQQQHHLNPLSLHPIPWNNTPPLGYPLPPTDFPDPFQPDPPFHFPDPHSAPPPAPFRFSDFDSDDWMDSLIAAADTPSWHTNADFPFPSDLNRLIFPSSDAATATATASLPLQPTPPPAPQDPVNTTLSSEADSAHPLLKALTECASLAESEPDQAAESLTRLRKSVSQHGNPTQRVAFYFCEALARKIWAEKEKAEPNTGTTSEELTLAYKALNDACPYSKFAHLTANQAILEATEGASNIHILDFGIVQGIQWAALLQAFATRSSGKPNKIKISGIPAIALGVSPGPSLSATGNRLSEFAKLLDLNFEFAPILTPIHDLDRNSFCIHPDEALAVNFMLQLYNLLDEPPTVVDTALRLAKSLNPKIVTLGEYEASLTRVAFLNRFKTAFNYFSALFESLEPNLPADSPERYQVESLLLGRRIAAVVGPGPVRESMEAMEQWRVLMERAGFESVSLSHYAISQAKILLWNYSYSSLFSLVESKPPGFLSLAWKDVPLLTVSSWR 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02828 550 MobiDBLite consensus disorder prediction 155 178 - -
Spst2g02828 550 ProSiteProfiles GRAS family profile. 175 550 IPR005202 -
Spst2g02828 550 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 167 545 IPR005202 -
Spst2g02828 550 MobiDBLite consensus disorder prediction 61 100 - -
Spst2g02828 550 MobiDBLite consensus disorder prediction 36 105 - -
Spst2g02828 550 MobiDBLite consensus disorder prediction 36 55 - -
Spst2g02828 550 Pfam GRAS domain family 185 550 IPR005202 -
Spst2g02828 550 Coils Coil 27 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02828 Spst-Chr2 28193751 28195403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02828 16 550 GRAS Transcription Factor Family AT5G66770 57.046 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst2g02828 GRAS 1.3e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02828 - - gmx:100800989 701.819