Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02802 ATGGAGATAGAACCAGCCACAACCAACGAAGAGGGTGTTGCAGAAAATGGTGAGACGATGGGAGTTTCTGCAAAGAGAGGGATGTATCTTGTGTGGGAAGATTTAACTGTGGTGGTTCCAAATTTTGGGAATGGACACACCAAGAGATTGATTAACGGGTTGAGTGGATATGCTGAACCTAACAGAATCATGGCTATCATGGGTCCTTCTGGCTCTGGAAAATCCACTCTTCTTGATGCTTTAGCAGACACAATGCTGGGAACACTAACGGTGAGAGAGACAATAAATTACTCAGCGAAACTAAGGCTTCCAAGTAGCATGAGGAAAGAAGAGGTGAATGAGATAATAGAGGGAACAATTACGGAGATGGGTCTTGAAGAATGTGCAGATAGGATAATAGGGAATTGGCACTTGAGAGGTATAAGCGGTGGAGAAAAGAGAAGGCTAAGCATAGCACTTGAAATCCTCACAAGGCCTTCTCTCTTGTTCCTTGATGAACCCACCAGTGGTCTCGACAGTGCCTCAGCATATTTTGTTGCCCAAACTTTGAGAAATTTGGCTCATGATGCCAAGACTGTTATCTCTTCTATTCACCAACCGAGCAGTGAGGTTTTTGCTCTCTTTGACCATCTCTTTCTTCTTTCTGGGGGTCAAACAATATACTTTGGACCTGCACAAAAGGCAACTGAGTTCTTTTACAATGCAGGATTCCCATGTCCAAGTAGAAGAAACCCTTCTGATCATTTCCTCCGTTGTATCAATTCAGACTTCGACGCTGTCACAACCACTATGATGGCCTCTCAAACACTCCAT 813 0.4391 MEIEPATTNEEGVAENGETMGVSAKRGMYLVWEDLTVVVPNFGNGHTKRLINGLSGYAEPNRIMAIMGPSGSGKSTLLDALADTMLGTLTVRETINYSAKLRLPSSMRKEEVNEIIEGTITEMGLEECADRIIGNWHLRGISGGEKRRLSIALEILTRPSLLFLDEPTSGLDSASAYFVAQTLRNLAHDAKTVISSIHQPSSEVFALFDHLFLLSGGQTIYFGPAQKATEFFYNAGFPCPSRRNPSDHFLRCINSDFDAVTTTMMASQTLH 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02802 271 Gene3D - 4 85 IPR027417 -
Spst2g02802 271 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 30 241 IPR003439 GO:0005524
Spst2g02802 271 SMART AAA_5 60 217 IPR003593 GO:0016887
Spst2g02802 271 ProSitePatterns ABC transporters family signature. 141 155 IPR017871 GO:0005524|GO:0016887
Spst2g02802 271 Pfam ABC transporter 53 169 IPR003439 GO:0005524
Spst2g02802 271 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 23 83 - -
Spst2g02802 271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 233 IPR027417 -
Spst2g02802 271 Gene3D - 86 235 IPR027417 -
Spst2g02802 271 Pfam ABC-2 type transporter 198 255 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02802 Spst-Chr2 27902021 27906182 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02802 49 212 Calmodulin-binding Proteins AT2G36910 24.762 3.09e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02802 K05681 - gmx:100788651 449.899