Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02798 ATGGAGATTGAGGCAGCAACCACCGATGGCAACAAAGCCTTCAACTGGGGTGCAGCTGCTACTGAGACTCAGAGGGATGAGCCATACACTGGCTTTGATAGAGGAAGCTTCTTGGCTTGGCAAGATCTCAGAGTGGTGCTTCCAAACTTTGGGAAGGGACCAACTAAAAGGTTGCTTAATGGCCTCAATGGCTATGCTGAGCCTGGCAGAATCATGGCTATCATGGGTCCTTCTGGCTCTGGAAAATCTACCCTTCTTGATGCACTTGCAGGTAGACTCTCAAAAAACGTGGTTATGACAGGAAATGTTCTTCTAAATGGGAAGAAAAAAAGCCTAGGTTACGGCGGTGTTGCTTACGTAACTCAAGAGGATGTGTTGCTGGGAACCCTTACTGTGAAGGAAACCATATCCTACTCAGCCCATCTTCGTCTTCCAACATCAACGAGCAAAGAAGAAGTTAACAGCATCGTCGATGGAACAATCATAGAAATGGGTCTTCAAGATTGTGCTGATAGGTTGATTGGTAACTGGCACTTGAGAGGCATAAGTGGAGGGGAGAAGAAGAGGCTTAGCATTGCTCTTGAGATCCTTACAATGCCTCGCTTACTGTTCCTTGATGAACCCACCAGTGGCCTTGACAGTGCCTCAGCATTTTTCGTTGTTCAAACTCTTAGAAATGTTGCTCGTGATGGAAGAACCGTTATCTCTTCCATTCACCAACCCAGCAGTGAAGTCTTTGCACTCTTTGACGACCTTTTCCTGCTATCTGGCGGTGAAACAGTTTATTTTGGTGAAGCAAAATCTGCAATTGAGTTTTTTGCTGAAGCTGGTTTCCCTTGTCCACGTAAAAGAAATCCTTCTGATCACTTCCTACGATGCATCAATTCTGATTTCGACATTGTAACGGCTACACTGAAGGGATCTCAGAGAATTCATGATGTTCCAAATTCAGCAGATCCTTTCATGAATTTGGCTACAGCAGAGATTAAGGCAATGCTAGTTGAGAAATATAGGCGTTCAACATATGCCAGGAGGGCAAAGAACAGAATTCAAGAACTATCTTCAGATGAAGGGCTTGAACCATCGACACAACATGGAAGTCAAGCTAGTTGGTGGAGGCAACTCACAACTTTAACACAGAGATCATTTGTGAACATGTGTAGAGATGTGGGGTACTACTGGTTGAGGATCATAATTTACATCATAGTATCCATATGTGTGGGAACCGTTTATTTTGACATTGGCTATAGCTACACTTCAATCCTGGCCCGTGGTGCCTGCGGTGCATTCATATCAGGATTTATGACATTCATGTCAATTGGGGGCTTTCCATCATTCATTGAAGAAATGAAGGTATTTTATCGAGAAAGACTTAATGGATACTATGGAGTTGCAGCATATATTTTAGCCAACTTCCTTTCTTCTTTCCCGTTCTTGGTGGCTATTGCTCTTACTACTAGCACCATCACCTATAACATGGTGAAGTTCAGGCCAGGAATCAGTCACTTTGTGTTTTTCACTATCAACATCTACAGCTGCATTTCTGTAATAGAGAGCCTCATGATGGTTGTGGCTTCACTTGTTCCAAATTTCCTCATGGGAATAATTACAGGGGCTGGAATAATAGGAATCATGATGATGACCTCCGGATTCTTCAGGTTGCTGTCTGATCTTCCAAAGCCAGTTTGGCGCTACCCAATTTCATATATCAGTTATGGTTCATGGGCAATACAGGGTGCCTACAAGAATGACTTGCTTGGGCTTGAGTTTGATCCTCTGATACCTGGTGACCAAAAATTGACCGGAAAATATGTGATCACACACATGTTAGGCATTGAATTAAACCATTCAAAGTGGTGGGACTTAGCAGCTCTATTTGTGATTCTCATAGCTTACAGACTTCTGTTCTTCACTGTTCTGAAGTTGAAGGAGAGAGCATCACCACTATTTCAGACACTTTATGCCAAGCGAACCATCCAACAGCTTGAAAAAAGACCCTCTTTCAGGAAGATGCCATCTTTCCCTTCTCAGAGGCATCAACCCCTCCATTCTCTTTCTTCTCAAGATGGTCTCGATTCTCCACTCCACTGA 2091 0.4347 MEIEAATTDGNKAFNWGAAATETQRDEPYTGFDRGSFLAWQDLRVVLPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDALAGRLSKNVVMTGNVLLNGKKKSLGYGGVAYVTQEDVLLGTLTVKETISYSAHLRLPTSTSKEEVNSIVDGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTMPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKSAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRIHDVPNSADPFMNLATAEIKAMLVEKYRRSTYARRAKNRIQELSSDEGLEPSTQHGSQASWWRQLTTLTQRSFVNMCRDVGYYWLRIIIYIIVSICVGTVYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILANFLSSFPFLVAIALTTSTITYNMVKFRPGISHFVFFTINIYSCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGSWAIQGAYKNDLLGLEFDPLIPGDQKLTGKYVITHMLGIELNHSKWWDLAALFVILIAYRLLFFTVLKLKERASPLFQTLYAKRTIQQLEKRPSFRKMPSFPSQRHQPLHSLSSQDGLDSPLH 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02798 696 ProSitePatterns ABC transporters family signature. 182 196 IPR017871 GO:0005524|GO:0016887
Spst2g02798 696 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 282 IPR003439 GO:0005524
Spst2g02798 696 CDD ABCG_EPDR 35 264 - -
Spst2g02798 696 Pfam ABC transporter 59 210 IPR003439 GO:0005524
Spst2g02798 696 Gene3D - 39 276 IPR027417 -
Spst2g02798 696 MobiDBLite consensus disorder prediction 673 696 - -
Spst2g02798 696 Pfam ABC-2 type transporter 373 583 IPR013525 GO:0016020|GO:0140359
Spst2g02798 696 MobiDBLite consensus disorder prediction 664 696 - -
Spst2g02798 696 Pfam ABC-2 type transporter 239 295 IPR043926 GO:0140359
Spst2g02798 696 SMART AAA_5 68 239 IPR003593 GO:0016887
Spst2g02798 696 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 274 IPR027417 -
Spst2g02798 696 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 32 665 - -
Spst2g02798 696 FunFam ABC transporter G family member 11 32 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02798 Spst-Chr2 27863325 27868479 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02798 21 251 Calmodulin-binding Proteins AT2G36910 28.926 4.72e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02798 K05681 - gmx:100777598 1275.77