Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02764 ATGGAGTTTGTGGGGAGGACAGTTAGGAAAGAGGTGAAGGGGGTTGGGTTTATCTCGGGAACAGTGAAATCCTATGACCCTTCCTCTGGTTTTTTCGAGATCGTCTACGAAGATGGTGATTCTGAGGAGTTGGAGTCATCTGACGCGACTTCTCTCTTGCAATTCCAACCGGAGAGTGTCAAGGCTAAGCCTCGGGTTGGTCGGAAACCTAAGAAGCGCCGCCGCTTTGAGCGGAAGAGTGATGCTGGAACCTGTCCGGGCAATGTTAGCGAGAATTTGGTGGGGGAAGGTAGTGATATTAGGGGGGTTTTGGATGAAGATGTTTCTTCTGCCAGTGGTGGGGATTTGGATTTGGATAGTGGGGGGTCAGAGAGAGTCTTGGATGGTATAACTGGGAATGGAGGGAATCTTGAGGGCAATGTTAGTGGGACTGTGGAGACAAATGGGGGTAGAGAAACTCTTAGAGAGGAGATTGGTTTAGAAGATAGATTGAACAAAAGTTTATCCGGTAATGGTAGTTGTGTTAAAGATGGACTTGATTTGAATGCTAGGCTTAATCTAGATGAGGATTTAAATTCAAATGATGGGTGTAATTTGCCTCTTGACACTGGTTTGAAGAGAAGAGATTGCATTGATTTAAACTTGGATGTGAGTAATGAGGATGATGTTGGCCTGAATGTGGGTCACTTGGGTAGTTTGGTAGGGGAGGTAATGCAGCGGGAATGTAACTTTGATTTGAATGTGGAGGTAGAATGTGAAGAAGGTAAGGAAACTAGATGTCCTGACGAAGGAAATGGACATTCTGGTGTGGCTGATGTCTTGTTTGGTAAGATGGGGCAATTGCAAAGGGAAGAGGTAAATGTTAATAATAGTTCTGTGGAAGATAATGTTGTCAACTGTAATTTGAATCATACCTTTGATGCTGTCTCTGAGGGAATTCATGTTTCTCCTGATCGTCAAGCTAAAGATGTTTCTTTGTGTTTGGTTGAGGAAAATGGAGGTGATGATGGCACAGAGGACACGGAAACCATTAATTCTCATCAGATTTCAAATGCAATTTCGCTTAGGGATTCTAATTCTGGAGAGGCTCAGCAAGTTGATTGTCCTTCTGAAGGTGGCATTGCCATAACTCATGAATACCAAGATGATCCAGGAAGTCCATGCAAACAAGAAAAATTCCAAGAGGTTCCAGGAAGTCCATGCAAACAAGAAAATTTCCAAGATATTCCAGGAAGTCCATACAAACAAGATAATGGCAGAAGGAAAAGAAGAAAATTATCAGATAATCCCGAAGGCACACCAGAGACTGTATTAAGGAGGAGTTCTCGGCGGGCATCAGCTAGAAAACGGCTTTCAAGCACCATACTAGTGGAGGTGGCTGGTGATCCTTTGTTAAGCTTGGGAACCCGTGCCTTAACAGAAGAAAAGCCTTTAATCCGCGATTCTCAGAAACCTGAGCAATATAATGATTCTGGGAGATACGAACAATACAACAATCCTCTTCCAAAGCTGCAATTGCCCCCATCTTCCAGAAATTTGAATTTAGATGGTGTTCCTGTTCTTGAACTTTTTTCTATTTATGCTTGTTTAAGATCGTTCAGTACTTTATTATTTTTGAGTCCATTTGAGTTGGAGGATCTTGTAGCTGCACTGAAGTCTGAAATCCCATGTATATTATTTGACAATATTCATGTTTCTATTTTGCAAACTCTGAGAAAGCATTTGGAATACCTTTCCAGTGAGGGTAGCCAATCTGCATCCAATTGCCTGCGGAATCTTAACTGGGATTTTTTGGACCTGGTCACATGGCCTATTTTCATGTCCGAGTACCTTCTGATCCATGGCTCAGGATTTAAAACTGGTTTTGATCTTAAACATCTAATGTTCAGAACTGATTACTACAAACAACCTGTAATGGTGAAGGTCGAGATTCTTCAGTATCTGTGTGATGATATGATTGAATCGGAATCCATAAGGTCAGAGCTTAACAGAAGATCTTTGGTGACCGAGAACGAAATGGGTTTTGATCAGAGTATGTATTTTGACGCTTCCAAGAAAAGAAGAGCTGTAATGGATGTGTCTGGTGGCTCCTGCTTGACTGAGGAGAATGTGGATGACACAACTGACTGGAACAGTGATGAATGTTGCCTGTGCAAGATGGACGGTAGTTTAATATGCTGTGATGGGTGCCCTGCAGCATTTCACTCACGATGTGTGGGAATTGCCAGTGACAAACTTCCTGAAGGTGACTGGTATTGCCCTGAGTGTGGAATTGGCAAACACATGGCTTGGACGAAATCACGAAGGTCACTTCGAGGAGCAGACTTATTAGGGAAGGATATGGATGGCAGTATCTATTTCAACAGCTGCGATTACCTGTTAGTGTCAAACTCATCGGAAGCAGGGTCATTGTTCAATTACTACCACAGAAATGATATACCTGGAGTAATTGAAGCTCTAAAATCTATGAATCCTTTATATGAAGGCATACTAATGGCTATCTATAAGCATTGGGATATCAGAGCTAACTTGAGTGTGGGGGATAGTGTTTTCAATCAAAGTTCCAGCAAGGACATGTTGATGAAAGGAGAATATTCAACTATGCATACATCTTTTACTTCAGAGGCATGTCTGGACAAGAATCAGGCTAATGGTCAAAGAAAGTTGGACGAAAATTCAACTATTGACTGTTGTATGCAACTCGCCCAAGAGTTCCCAAAAGTTGGGAACCTCATAGGCTCAATGACCACCATAGAAAGTCCTTGTGTTGCTTCAGATGGATCAGCTGATACCACACAGATGAGAACAGGCATCGACAATGTTCAGATATATGGGTTCAATGATTCCGATAGATGTAATGAATCATTGAATCGGTCAGGAATTCCAGAAAGACGTAATCCTGTTGGTGACTGTTCTTTGACATCTTCCAGCTTGGATGTGGGACGTAAAATAAACTTAAGATCTGTAGGTGCCAGCAGTACCCCCTCCATGGACAATATGGATACTTCAGAAGCACCTCGTGGAATCGACTACATAAACTATTATAGCTTTGCCCGAACAGCTTCATTTGTTGCACAGGAGTTAATGTGTAAGTCACCTGAAAAGATGAATAAGGTTTTTGCAATGTCTGAAGAAGAAATTATTTCAGACCAAGCAAAGGTCATTATGAAGAAGTCTACTAACTTTTGTTGGCCAAGTATTCCCAACTTGGATGCAGTTTCCCAAAAAGAAAAATGTGGATGGTGCTTTACTTGCAAAGTTGCTAATGAAGACAGGGATTGTTTGTTTAATTCAGTTGTGAAGCCTGTTTGGGAAGTGTCTAATAGCACTTTAGTCGGTCTTCAACCCAGGAATATTCAGAATGGACATCTTAGAGATATCATATGTCTTATCTTCTCTCTTGAGGTCCGATTACGTGGGCTTTTGTTGGGTCCATGGTTGAATCTGCAGCAAACTAATCTTTGGCATAATGATCTTTTGAAGACGTCTGATTTTCATCATGTTAAACAATTATTGCTTCTTTTAGAATCCAATTTGCGGCCATTTGCTCTTTCGCCAGATTGGTTAAAGCATGTGGATTCTGTTCCTACAATGGGATCCGCCATTCATATTGTGGTCAATTCATCACGCTCATATTCCAGGCATGGTATTGGAAAGAAAAGGGCCAGGTATTCGGATACTGAAACTAGTTCATCTTCAAACAGCGCTAGTGGTTTGGGGATGTATTGGTGGAGAGGTGGCAGGCTTTCCCGAAAATTGTTTAATTTGAAGGCTTTGCCTCACTCCTTGGTTACCAAGGCTGCTAGACAAGGTGGGTGTAGGAAGATACCAGGAATTCTATATCCTGAGAATTCAGACTTTGCCCGGAGAAGCAGATTTGTTGCTTGGCGAGCAGCTGTTGAGATGTCAACAACTGCTGAGCAGATTGCTTTACAGGTTAGAGAGCTCTATTCGAACATAAGGTGGCTTGATATTGAGAACAATCATCCCCTATGTGTATTGGACAAGGAATCTCGAAAATCAGTCAGGCTGTTCAAAAAATCAATTGTACGCAGGAAGTGCACTGAAGGGCAATCTGTGAAATACCTTATTGATTTTGGAAAGAGAAGGGCTATTCCAGATGTTGTTCTTAAACATGGTTTTTTATTGGAACAATCCTCTAGTGAGAGGAAAAAATATTGGCTGGAGGAGTCTTATGTTCCAATGCACCTTCTAAAGAATTTTGAGGAAAAAAGAATTGTCCGCAAGTCCACTGATAAGAAACTTGGAAAAATTCTTGAGTTTGCTAGAGTAAAGAAGAAAATTCCTCAGCAAAGGGCATTTTCATATTTGTTTACCAGATTGGAAAGATCTGATTGTCATCGGTGTGAGCACTGCAACAAAGATATTGCAACGAGGTAA 4401 0.4154 MEFVGRTVRKEVKGVGFISGTVKSYDPSSGFFEIVYEDGDSEELESSDATSLLQFQPESVKAKPRVGRKPKKRRRFERKSDAGTCPGNVSENLVGEGSDIRGVLDEDVSSASGGDLDLDSGGSERVLDGITGNGGNLEGNVSGTVETNGGRETLREEIGLEDRLNKSLSGNGSCVKDGLDLNARLNLDEDLNSNDGCNLPLDTGLKRRDCIDLNLDVSNEDDVGLNVGHLGSLVGEVMQRECNFDLNVEVECEEGKETRCPDEGNGHSGVADVLFGKMGQLQREEVNVNNSSVEDNVVNCNLNHTFDAVSEGIHVSPDRQAKDVSLCLVEENGGDDGTEDTETINSHQISNAISLRDSNSGEAQQVDCPSEGGIAITHEYQDDPGSPCKQEKFQEVPGSPCKQENFQDIPGSPYKQDNGRRKRRKLSDNPEGTPETVLRRSSRRASARKRLSSTILVEVAGDPLLSLGTRALTEEKPLIRDSQKPEQYNDSGRYEQYNNPLPKLQLPPSSRNLNLDGVPVLELFSIYACLRSFSTLLFLSPFELEDLVAALKSEIPCILFDNIHVSILQTLRKHLEYLSSEGSQSASNCLRNLNWDFLDLVTWPIFMSEYLLIHGSGFKTGFDLKHLMFRTDYYKQPVMVKVEILQYLCDDMIESESIRSELNRRSLVTENEMGFDQSMYFDASKKRRAVMDVSGGSCLTEENVDDTTDWNSDECCLCKMDGSLICCDGCPAAFHSRCVGIASDKLPEGDWYCPECGIGKHMAWTKSRRSLRGADLLGKDMDGSIYFNSCDYLLVSNSSEAGSLFNYYHRNDIPGVIEALKSMNPLYEGILMAIYKHWDIRANLSVGDSVFNQSSSKDMLMKGEYSTMHTSFTSEACLDKNQANGQRKLDENSTIDCCMQLAQEFPKVGNLIGSMTTIESPCVASDGSADTTQMRTGIDNVQIYGFNDSDRCNESLNRSGIPERRNPVGDCSLTSSSLDVGRKINLRSVGASSTPSMDNMDTSEAPRGIDYINYYSFARTASFVAQELMCKSPEKMNKVFAMSEEEIISDQAKVIMKKSTNFCWPSIPNLDAVSQKEKCGWCFTCKVANEDRDCLFNSVVKPVWEVSNSTLVGLQPRNIQNGHLRDIICLIFSLEVRLRGLLLGPWLNLQQTNLWHNDLLKTSDFHHVKQLLLLLESNLRPFALSPDWLKHVDSVPTMGSAIHIVVNSSRSYSRHGIGKKRARYSDTETSSSSNSASGLGMYWWRGGRLSRKLFNLKALPHSLVTKAARQGGCRKIPGILYPENSDFARRSRFVAWRAAVEMSTTAEQIALQVRELYSNIRWLDIENNHPLCVLDKESRKSVRLFKKSIVRRKCTEGQSVKYLIDFGKRRAIPDVVLKHGFLLEQSSSERKKYWLEESYVPMHLLKNFEEKRIVRKSTDKKLGKILEFARVKKKIPQQRAFSYLFTRLERSDCHRCEHCNKDIATR 1466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02764 1466 SUPERFAMILY FYVE/PHD zinc finger 698 756 IPR011011 -
Spst2g02764 1466 MobiDBLite consensus disorder prediction 58 97 - -
Spst2g02764 1466 ProSitePatterns Zinc finger PHD-type signature. 715 756 IPR019786 -
Spst2g02764 1466 CDD PHD1_AIRE 714 756 - -
Spst2g02764 1466 SMART PHD_3 714 757 IPR001965 -
Spst2g02764 1466 MobiDBLite consensus disorder prediction 375 445 - -
Spst2g02764 1466 SMART testlast3 517 577 IPR018501 -
Spst2g02764 1466 ProSiteProfiles DDT domain profile. 517 577 IPR018501 -
Spst2g02764 1466 ProSiteProfiles Zinc finger PHD-type profile. 712 759 IPR019787 -
Spst2g02764 1466 MobiDBLite consensus disorder prediction 415 430 - -
Spst2g02764 1466 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 700 782 IPR013083 -
Spst2g02764 1466 CDD Tudor_AtPTM-like 4 54 IPR047365 -
Spst2g02764 1466 Pfam PHD-finger 715 756 IPR019787 -
Spst2g02764 1466 PANTHER PHD FINGER FAMILY PROTEIN 2 1465 - -
Spst2g02764 1466 Pfam DDT domain 521 573 IPR018501 -
Spst2g02764 1466 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 631 663 IPR028942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02764 Spst-Chr2 27519923 27530494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02764 1 1463 PHD Transcription Factor Family AT5G12400 40.967 0.0 929
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Spst2g02764 DDT 4.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02764 - - vun:114169688 2319.66