Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02762 ATGGGATTTATGCGGCAAGAAGAAGGGTCGTCTTCTGTAATTTCTTCACCCCTGCAGCTCTTCTCCATGATGTCACTTTCACCCAGCTTAGGTTCTCCCAACAATGCCTTGCTTAGAGAAATGAAATCCGAGGAAAGGGGTTTGTACTTGATCCATTTGTTGCTCACTTGTGCAAATCATGTAGCTGCTGGTAACCTTGAAAATGCAAACACCACACTTGAGCAAATTTCAGTGCTTGCTTCCCCGGATGGGGATACTATGCAGCGAATCGCCACTTATTTTATGGAATCGCTTGCAGATCGGATTCTGAAAACATGGCCCGGGATCCACAGAGCGCTCAACTCAACTAGAGTGACTATGCTATCTGAAGAAATTCTTGTTCAGAAGCTCTTCTTTGAGCTTTTCCCTTTCTTGAAGGTGGCATATGTTCTAACAAATCAGGCCATCATTGAGGCAATGGAAGGGGAGAAAGTGATTCACATAATTGATCTCAATGCTGCTGAAGCTGCTCAGTGGATTGCTCTCCTTCAAGTTTTGAGTGCGCGTCCCGAAGGCCCTCCTCATTTGAGAATCACTGGGATTCATCAGAAAAAGGAGATTCTGGATCAGGTAGCTCATAGACTAACTGAAGAAGCAGAAAAGTTGGATATACCATTCCAATTCAACCCTGTAGTCAGCAAACTAGAAAATCTTGATTTTGACAAACTTCGTGTGAAAACTGGGGAAGCACTAGCAATAAGTTCCATTCTCCAATTACATTCCCTCTTGGCCTGGGATGATGAGGCCTTACGGAGGAAATCTCCTCTTCTGTTAAAAGGCTCAAACGGAATTAACCTGCAAAGAGTCTTGCCACTGAGCCAAAGCACATTGGGGGATTTACTTGAGAAAGATGTGGTTAACGGGTACACCCCAAGTCCCGACTCAACCTCATCATCACCAGCATCTTTAGCTACTTCGAATTCAATAAATATGGAGAGCTTTCTTAATGCCTTATGGGGTTTATCACCAAAGGTCATGGTTGTGACGGAGCAAGACTGTAACCATAATGGTCCAACTCTGATGGATAGGCTACTTGAAGCACTGTATTCTTATGCAGCATTGTTTGATTGTTTGGAATCCACTGTCTCAAGAACATCATTGGAGAGATTAAGGGTGGAGAAGATGATTTTTGGGGAGGAAATAAAGAACATCATTGCATGTGAGGGGCCTGAAAGAAAGCAGAGACATGAAAAGCTTGACAAGTGGTTCCAGAGATTTGATCTAGCTGGGTTTGGTAATGTGCCTTTGAGCTACTATGGTATGTTGCAAGCAAGGAGGTTCATCCAGAGCTATGGTTGTGAAGGATATAGAATGAGGGATGAAAATGGTTGCGTATTAATCTGCTGGCAGGATCGGCCAATGTTTTCAATATCAGCTTGGAGATCTAGGAAGTAA 1434 0.4351 MGFMRQEEGSSSVISSPLQLFSMMSLSPSLGSPNNALLREMKSEERGLYLIHLLLTCANHVAAGNLENANTTLEQISVLASPDGDTMQRIATYFMESLADRILKTWPGIHRALNSTRVTMLSEEILVQKLFFELFPFLKVAYVLTNQAIIEAMEGEKVIHIIDLNAAEAAQWIALLQVLSARPEGPPHLRITGIHQKKEILDQVAHRLTEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSILQLHSLLAWDDEALRRKSPLLLKGSNGINLQRVLPLSQSTLGDLLEKDVVNGYTPSPDSTSSSPASLATSNSINMESFLNALWGLSPKVMVVTEQDCNHNGPTLMDRLLEALYSYAALFDCLESTVSRTSLERLRVEKMIFGEEIKNIIACEGPERKQRHEKLDKWFQRFDLAGFGNVPLSYYGMLQARRFIQSYGCEGYRMRDENGCVLICWQDRPMFSISAWRSRK 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02762 477 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 473 IPR005202 -
Spst2g02762 477 Pfam GRAS domain family 50 474 IPR005202 -
Spst2g02762 477 ProSiteProfiles GRAS family profile. 41 474 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02762 Spst-Chr2 27507442 27508875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02762 1 477 GRAS Transcription Factor Family AT1G50420 63.918 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst2g02762 GRAS 4.1e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02762 - - gmx:100814131 844.728