Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02754 ATGGTTGGCAGAGGTGTATGTATTTTTGTCACTTTTCCCCCAAAAGTTTCCTCCAAAGCTTTCGATTCTCTTCGCTCTCCACCGATCATGCTTCAAAGCTTGGTCCCGCGATCCCCCCGCACTTCCAACCCTAACGACATGAAAACTAAGCGCGCCGTTGAAACCGCTGATTCCCCAGCCGACGAACCTTCCTTCAAGCGAACCAACTTCTCCGCCGATAAAACCGCCGAGGAGGAGCAGGCCTTCGATGCTGAAACTCACGGCGGGGACTCCACCGGCCTCAAACTCCTCGGCCTCCTACTGCAATGCGCTGAGTGCGTCGCCATGGACAACCTCCACTTCGCCAACGACCTCCTCCCGGAGATCGCCGAACTCTCGTCGCCGTTTGGTACCTCACCGGAGCGCGTCGGAGCGTACTTCGCGCAGGCGCTGCAGGCGCGCGTGGTGAGCTCCTGCCTCGGCTCCTACTCCCCGCTGACCGCGAAATCGGTAACCCTAACTCAGTCGCAGCGAATCTTCAACGCGTTCCAATCCTACAACTCAGTCTCGCCGCTGGTGAAGTTCTCGCACTTCACAGCGAACCAAGCCATCTTCCAGGCCCTGGACGGCGAGGATCGCGTCCATATCATCGACCTCGACATCATGCAAGGCCTCCAATGGCCGGGATTGTTCCACATCCTCGCCTCTCGCACGAAGAAGATCCGCTCCATGAGAATCACCGGATTCGGATCCTCCTCGGAGCTCCTCGACTCCACCGGTCGGAGACTCGCGGATTTCGCGAGCTCGCTCGGGCTACCGTTCGAGTTTCACCCGGTGGAGGGGAAAATCGGAAGCGTGACCGAACTCAGTCAACTCGGTGTTCGACCTAACGAAGCGATCGTGGTGCACTGGATGCATCATTGCTTATATGATATAACCGGCAGCGATTTAGGGACGTTGAGATTGCTGACTCAGCTTAGGCCGAAACTGATCACGACCGTCGAGCAGGATCTAAGCCATGCGGGGAGCTTCCTGGCGCGGTTCGTGGAGGCCTTGCATTATTACAGCGCGTTGTTCGACGCGCTTGGGGATGGTTTGGATGCGGACAGCCTGGAGAGACACACGGTGGAGCAGCAGCTATTGGGCTGTGAGATCAGGAACATCGTCGCCGTGGGCGGGCCCAAGAGGACCGGAGAGGTTAAGGTCGAAAGGTGGGCGGATGAGCTGAAACGGGCCGGGTTCCGGCCCGTTTCCCTCCGGGGAAACCCGGCTGCACAGGCGAGTTTGTTGCTTGGAATGTACCCTTGGAGAGGTTATACTCTAGTTGAAGAAAACGGTTCCTTGAAGCTTGGTTGGAAGGATTTGTCTCTGTTGATTGCCTCTGCTTGGCAACCCTCTGATTTGATTACTTACCCTGATTGA 1401 0.5717 MVGRGVCIFVTFPPKVSSKAFDSLRSPPIMLQSLVPRSPRTSNPNDMKTKRAVETADSPADEPSFKRTNFSADKTAEEEQAFDAETHGGDSTGLKLLGLLLQCAECVAMDNLHFANDLLPEIAELSSPFGTSPERVGAYFAQALQARVVSSCLGSYSPLTAKSVTLTQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALDGEDRVHIIDLDIMQGLQWPGLFHILASRTKKIRSMRITGFGSSSELLDSTGRRLADFASSLGLPFEFHPVEGKIGSVTELSQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLTQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLDADSLERHTVEQQLLGCEIRNIVAVGGPKRTGEVKVERWADELKRAGFRPVSLRGNPAAQASLLLGMYPWRGYTLVEENGSLKLGWKDLSLLIASAWQPSDLITYPD 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02754 466 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 78 452 IPR005202 -
Spst2g02754 466 Pfam GRAS domain family 98 457 IPR005202 -
Spst2g02754 466 ProSiteProfiles GRAS family profile. 87 457 IPR005202 -
Spst2g02754 466 MobiDBLite consensus disorder prediction 35 49 - -
Spst2g02754 466 MobiDBLite consensus disorder prediction 33 87 - -
Spst2g02754 466 MobiDBLite consensus disorder prediction 50 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02754 Spst-Chr2 27287112 27290264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02754 47 460 GRAS Transcription Factor Family AT5G41920 66.587 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst2g02754 GRAS 3.7e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02754 - - pvu:PHAVU_011G024600g 799.275