Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02753 ATGGCCTCCATGGAAGACATGAACATGAGTGGGGAAATTGCACTTCCAGGGTTCCGATTCCACCCTACAGAGGAAGAGCTTCTCGATTTCTACCTTAAAAACATGGTTGTCGGAAAGAAACTCCGTTACGACGTTATTGGTTTCCTCAACATCTATCACCATGATCCTTGGGACTTGCCTGGTTTGGCTAAGGTTGGGGAAAGAGAATGGTACTTCTTCGTGCCGAGGGACAAAAAACATGGGAGCGGGGGAAGACCAAACCGGACCACTGAAAAAGGATTTTGGAAAGCCACCGGTTCAGACCGGAAAATAGTGACTTTGTCTGATCCGAAGCGCATAATCGGGTTAAGGAAGACCCTCGTTTTCTATCTGGGAAGAGCCCCCAGTGGACGCAAGACCGATTGGGTCATGAACGAGTACCGTTTACCTGACAATTGCAAATTACCCAAGGAAATAGTGTTGTGCAAGATATATCGAAAGGCAACTTCGTTGAAAGTTCTGGAGCAAAGGGCAGCAGAAGAGGAAGAGAGAGAGATGAAGCAAATGGTTGGTTCCCCTGCGTCTACACCTTCCTCCACGGACACCATGTCCTTTAGCAGCCCACAGGAAGAGCAAAACGTGCCCTTGTTGGAACATGTTCTTAAGAAAGAGTCTGAATCTGAAGAAGTGGCATTTGTGTCTAACATGACAGTGCCTAAACAAGAAATAGCAAGCACTCAATTGGGTTTGAAAGACAACAAAGGCACTTGTGGCACGTCACTGCAAATGCCCTTTGGGAAGGACAAACTTCCTGATTTGCAGCTTCCCATGCTCACAGATTGGACCCAAGATACCTTTTGGGCTCAGTTGAATAGTCCATGGCTCCAAAACTTTACTCCTTCCAACATCTTAAACTTCTACTGA 903 0.4662 MASMEDMNMSGEIALPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYLGRAPSGRKTDWVMNEYRLPDNCKLPKEIVLCKIYRKATSLKVLEQRAAEEEEREMKQMVGSPASTPSSTDTMSFSSPQEEQNVPLLEHVLKKESESEEVAFVSNMTVPKQEIASTQLGLKDNKGTCGTSLQMPFGKDKLPDLQLPMLTDWTQDTFWAQLNSPWLQNFTPSNILNFY 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02753 300 MobiDBLite consensus disorder prediction 172 202 - -
Spst2g02753 300 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Spst2g02753 300 SUPERFAMILY NAC domain 7 160 IPR036093 GO:0003677|GO:0006355
Spst2g02753 300 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 215 - -
Spst2g02753 300 Gene3D NAC domain 23 164 IPR036093 GO:0003677|GO:0006355
Spst2g02753 300 ProSiteProfiles NAC domain profile. 14 160 IPR003441 GO:0003677|GO:0006355
Spst2g02753 300 MobiDBLite consensus disorder prediction 184 202 - -
Spst2g02753 300 FunFam NAC domain-containing protein 67-like 23 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02753 Spst-Chr2 27265088 27266434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02753 9 300 NAC Transcription Factor Family AT2G17040 58.305 1.20e-113 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Spst2g02753 NAM 1.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02753 - - gmx:732555 538.495