Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02750 ATGTTCATTTTTCCTGTGGTTCTTGGCCACCATTCGGTCCTTCTCCAATCCAATAAACCATATCGCAAATTCCCATATCCTATACTTCATCATCTGATTGCAAGAATGATTAGTTCAAAGAAGATCATCCAAATGGCTTGGAAGTGGCAGAAAGAGGCCACGAATTACCAAAGGAAGAGAATTCTATGGCCCAAGACTCAAGAAAATGCAGCAAAAGCAGAAGGTTGCAGCAGCGTGTGGACGAAGGCTGAAAAGGGTCACTTTGTTGTGTACAGCATGGATAAGAAGCGCTTTGTGCTTCCCTTACTGTATTTGAAAAACAACATCTTCACAGAGCTTTTCAAGTTAGCAGAAGAAGAGTTTGGTCTTTCAAGCAACGTGCCCCTAACGCTGCCTTGTGAAGCGACGTTGATAGAGTACGTGATCACGTTGATCGACAAAAACGTAACCAAGGATCTGGAAGAAGCCGTGTTAATGTTCATAGCTACTACTCGATGCCAATCGTCCTTTGATCTTCATCGTGAACCAACCAATCAACATTTGCTTTGCAGCTTCTGA 558 0.4301 MFIFPVVLGHHSVLLQSNKPYRKFPYPILHHLIARMISSKKIIQMAWKWQKEATNYQRKRILWPKTQENAAKAEGCSSVWTKAEKGHFVVYSMDKKRFVLPLLYLKNNIFTELFKLAEEEFGLSSNVPLTLPCEATLIEYVITLIDKNVTKDLEEAVLMFIATTRCQSSFDLHREPTNQHLLCSF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02750 185 Pfam Auxin responsive protein 41 145 IPR003676 GO:0009733
Spst2g02750 185 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 36 178 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02750 Spst-Chr2 27237281 27238098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02750 59 153 Calmodulin-binding Proteins AT5G20810 33.673 9.92e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02750 - - gmx:100803097 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02750 2 27237281 27238098 Spst2g02750 2 27237281 27238098 ECH