Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02746 ATGGAAGCTATTTTCGTCACCAAACCAGCTTCTCATTCTCACTTCAAACCTAAACTCTCTTCAAACCCCAAACACTTCCTTAAACGACAACCCTTTCTCCCCATCCGCCACAACCCCACGCGCTTCCGCCACATCACTGCCGCACTACAAAACCAACAACAAGCAGCTTCTAAGGAAACCGAAGACGAGTCCTATGGCGAAGTCAAAGGCATCATCGGCAGCAGGGCACTCGACACCGCAGCCGGAATGGAGTACCTCATCGAGTGGAAAGACGGCCACGCGCCTTCCTGGGTTCCGGCCGACTTCATCGCCAAAGACGTCGTCGCCGAGTACGAGACCCCGTGGTGGACAGCCGCGAAGAAGGCCGACGAGTCCGCGCTGAGGAACATCCTCGACTCCGGCGACGGCCGCGACATCGACGCCGTTGACGCGGACGGCCGTACAGCACTTCTCTTCGTGTCGGGACTTGGTTCGGAGCCGTGCGTGAAGTTGTTGGCTGAGGCCGGCGCGAATCTGAACCACCGCGATCGCAGCGGCGGTCTTGCGGCGTTGCACATGGCGGCGGGGTACGTGAGGCCCGGCGTGGCAAAGCTGCTTCTGGATCTCGGCGTGGATCCCGAGGTGGCGGATGACCGCGGAAGAACCGCGTTGGATCTGGCGCGGGAGATTCTGAAGGCGACGCCGAAGGGGAATCCGATGCAGTTCGGGCGCAGGATTGGACTCGAGGGAGTGGTTAGGGTTTTGGAAGGAGCTGTGTTCGAGTTCGCGGAGGTGCAGGAGATTCTGGAACGGAGAGGGAAGGGAGAGAATTTGGAGTACCTTGTATGGTGGAAGGACGGTGGTGCGAATGAATGGGTGAAGGCGAAGTTTGTGGCGGAAGATCTGGTCAGAGACTACGAGGCTGGCCTTGAATACGCCGTGGCCGAGGCGGTGCTTGCAAAAAGGATAGCCGATGAAGGGACGCCGGAGTTTTTGGTTAAATGGGCCGATTTGGAAGAGCCCACTTGGGAGCCCCAGGAGAATGTGGACCCTGACCTTGTCAAAGCGTTCGAGGAAACTAACAACCAAGCCCAGCCCAGTAGTAATGGGCGCACTGTCGTTGTTTCCAATCAAGATAGCCCGTAA 1125 0.5822 MEAIFVTKPASHSHFKPKLSSNPKHFLKRQPFLPIRHNPTRFRHITAALQNQQQAASKETEDESYGEVKGIIGSRALDTAAGMEYLIEWKDGHAPSWVPADFIAKDVVAEYETPWWTAAKKADESALRNILDSGDGRDIDAVDADGRTALLFVSGLGSEPCVKLLAEAGANLNHRDRSGGLAALHMAAGYVRPGVAKLLLDLGVDPEVADDRGRTALDLAREILKATPKGNPMQFGRRIGLEGVVRVLEGAVFEFAEVQEILERRGKGENLEYLVWWKDGGANEWVKAKFVAEDLVRDYEAGLEYAVAEAVLAKRIADEGTPEFLVKWADLEEPTWEPQENVDPDLVKAFEETNNQAQPSSNGRTVVVSNQDSP 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02746 374 Pfam Chromo (CHRromatin Organisation MOdifier) domain 308 352 IPR023780 -
Spst2g02746 374 PANTHER MYOTROPHIN 51 233 - -
Spst2g02746 374 MobiDBLite consensus disorder prediction 352 374 - -
Spst2g02746 374 SUPERFAMILY Chromo domain-like 254 301 IPR016197 -
Spst2g02746 374 Gene3D - 62 109 - -
Spst2g02746 374 Gene3D - 252 301 - -
Spst2g02746 374 SUPERFAMILY Chromo domain-like 304 353 IPR016197 -
Spst2g02746 374 Pfam Ankyrin repeats (many copies) 165 220 IPR002110 GO:0005515
Spst2g02746 374 ProSiteProfiles Ankyrin repeat profile. 145 177 IPR002110 GO:0005515
Spst2g02746 374 SUPERFAMILY Ankyrin repeat 110 222 IPR036770 -
Spst2g02746 374 ProSiteProfiles Ankyrin repeat region circular profile. 145 177 - -
Spst2g02746 374 ProSiteProfiles Ankyrin repeat region circular profile. 179 211 - -
Spst2g02746 374 SMART chromo_7 64 116 IPR000953 -
Spst2g02746 374 SMART chromo_7 254 304 IPR000953 -
Spst2g02746 374 SMART chromo_7 305 355 IPR000953 -
Spst2g02746 374 ProSiteProfiles Chromo and chromo shadow domain profile. 306 362 IPR000953 -
Spst2g02746 374 SMART ANK_2a 179 208 IPR002110 GO:0005515
Spst2g02746 374 SMART ANK_2a 145 174 IPR002110 GO:0005515
Spst2g02746 374 SMART ANK_2a 110 141 IPR002110 GO:0005515
Spst2g02746 374 CDD CD3_cpSRP43_like 303 351 IPR030300 -
Spst2g02746 374 Gene3D - 302 354 - -
Spst2g02746 374 ProSiteProfiles Ankyrin repeat profile. 179 211 IPR002110 GO:0005515
Spst2g02746 374 Gene3D - 110 251 IPR036770 -
Spst2g02746 374 SUPERFAMILY Chromo domain-like 62 115 IPR016197 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02746 127 220 CAMTA Transcription Factor Family AT5G09410 36.000 7.93e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02746 K12271 - gmx:100818382 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02746 2 27210478 27211602 Spst2g02746 2 27210478 27211602 ECH