Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02728 ATGTCAACCAAAAACCCTAATCCCTCTTCTACTACCTCACTGCGTGCTTCAGTTCCCTTATCTGCAGCTATGCCAAACCCTAGAGTCTTCTTCGACATGACCATCGGCGGCCAACCCGCCGGTAGGATTGTGTTTGAGCTCTTCGCCGACACAACTCCCCGCACCGCTGAGAACTTCCGAGCCCTCTGCACCGGCGAGAAGGGAGTAGGCCGGAGCGGCAAGCCGCTTCACTACAAGGGCTCGGTCTTCCACCGTGTGATCCCGAATTTCATGTGCCAGGGAGGTGACTTCACTGCCGGAAACGGCACCGGTGGTGAGTCGATCTACGGCGCGAAGTTCGCCGACGAGAACTTTGTGAAGAAGCACACCGGCCCCGGCGTGTTGTCCATGGCAAACGCCGGTCCTGGAACTAACGGATCTCAGTTCTTCATCTGCACGACGAAGACGGATTGGCTCGACGGCAAGCACGTTGTGTTTGGACAGGTCGTTGATGGACTGAACGTGGTGAAGGAGATCGAGAAGGTCGGATCCGGCTCCGGCAAGACCGCGAGGCCGGTCGCCATCGCTGACTGCGGTCAACTGTCTTAG 588 0.5799 MSTKNPNPSSTTSLRASVPLSAAMPNPRVFFDMTIGGQPAGRIVFELFADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSVFHRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFVKKHTGPGVLSMANAGPGTNGSQFFICTTKTDWLDGKHVVFGQVVDGLNVVKEIEKVGSGSGKTARPVAIADCGQLS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02728 195 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 30 193 IPR002130 GO:0000413|GO:0003755
Spst2g02728 195 PIRSF Peptidylpro_ismrse 16 195 IPR024936 GO:0003755
Spst2g02728 195 Gene3D - 18 195 IPR029000 -
Spst2g02728 195 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 192 IPR002130 GO:0000413|GO:0003755
Spst2g02728 195 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 28 194 - -
Spst2g02728 195 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 154 169 IPR002130 GO:0000413|GO:0003755
Spst2g02728 195 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Spst2g02728 195 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 141 153 IPR002130 GO:0000413|GO:0003755
Spst2g02728 195 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Spst2g02728 195 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 83 95 IPR002130 GO:0000413|GO:0003755
Spst2g02728 195 SUPERFAMILY Cyclophilin-like 18 194 IPR029000 -
Spst2g02728 195 CDD cyclophilin_ABH_like 27 192 - -
Spst2g02728 195 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 78 95 IPR020892 GO:0003755|GO:0006457
Spst2g02728 195 FunFam Peptidyl-prolyl cis-trans isomerase 22 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02728 Spst-Chr2 27075423 27076010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02728 41 175 U-box Gene Family AT5G67530 50.000 5.92e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02728 K01802 - gmx:106795232 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02728 2 27075423 27076010 Spst2g02728 2 27075423 27076010 ECH