Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02716 ATGGGCCCAGGTTGTTCCTCAATTGGTTATGGAGAAGCAGAGGAACTAGGACCCTTCTTTCCTCAGGATAGTAGCCATCCAAAGCTAAAGTTGAACCCTTATTCTTGGAACAATGCTGCCAATCTTTTGTTTTTGGAAAGCCCGGTTGGAGTGGGATTCTCCTACACCAACACCAGCGCTGATATAAATCAGCTTGGTGACTCCATTACTGCTAAAGATTCACACACCTTTATCATCAATTGGTTTAGGAGATTCCCACAATTCAGATCACACAAGTTCTACATTGCCGGTGAAAGCTATGCAGGGCACTATGTTCCACAACTTTCTGAGCTTATTTTCGATAATAATCTCAATCCTGCTGATAAAGACCACATTAACTTCAAAGGGTTCCTGATTGGAAATGCATTATTGGACGACGAAACAGATCAAAAGGGTATGATAGATTATGCATGGGATCATGCAGTGATATCAGATGGACTATACCATAACATCACAGCCATATGCAACTTCAATCGTCCAATTCAAAATCAAACAAATGAATGCAACAGGGAACTGAATAAGTACTTCGATGTGTATAAGATTATTGACATGTATAGCTTGTACACTCCCAGGTGTTTCAGTAACTTCAGCAGCACCACAAAGGAAGCCTCTCAAACTTCTTCCAGAATTAATGGGTGGCAAAGAAAAAGAGCTGGATATGATCCCTGTGCATCCGATTACACAGAAGTTTACCTAAACAGGCCAGAAGTTCAAAAGGCACTGCATGCCAATGTCACCAATATTCCCTATCCATGGACACACTGCAGTGATAATATCACATTTTGGAATGACTCACCACAATCCATGCTTCCAACCCTCAAGAAGCTTATTGCTGGTGGAATTCGCATTTGGGTTTACAGTGGAGATACCGATGGAAGAATTCCTGTAACTGCAACACGATACACTCTAAGAAAGCTGGGGCTTGGGATTCTGGAAGATTGGAGTCCCTGGTATACTAGTCGCCAGGTGGGAGGATGGAGCATTGTGTATGATGGGCTTACTTATGTGACCATAAGAGGTGCTGGTCATCAAGTTCCAACTTTCACTCCCAAGCAAGCTCTGCAATTGCTTCGACACTTCATAGAAAATAAGAAATTACCATCTCAACCAATTTAA 1155 0.4208 MGPGCSSIGYGEAEELGPFFPQDSSHPKLKLNPYSWNNAANLLFLESPVGVGFSYTNTSADINQLGDSITAKDSHTFIINWFRRFPQFRSHKFYIAGESYAGHYVPQLSELIFDNNLNPADKDHINFKGFLIGNALLDDETDQKGMIDYAWDHAVISDGLYHNITAICNFNRPIQNQTNECNRELNKYFDVYKIIDMYSLYTPRCFSNFSSTTKEASQTSSRINGWQRKRAGYDPCASDYTEVYLNRPEVQKALHANVTNIPYPWTHCSDNITFWNDSPQSMLPTLKKLIAGGIRIWVYSGDTDGRIPVTATRYTLRKLGLGILEDWSPWYTSRQVGGWSIVYDGLTYVTIRGAGHQVPTFTPKQALQLLRHFIENKKLPSQPI 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02716 384 SUPERFAMILY alpha/beta-Hydrolases 2 381 IPR029058 -
Spst2g02716 384 Pfam Serine carboxypeptidase 2 376 IPR001563 GO:0004185|GO:0006508
Spst2g02716 384 PRINTS Carboxypeptidase C serine protease (S10) family signature 81 106 IPR001563 GO:0004185|GO:0006508
Spst2g02716 384 PRINTS Carboxypeptidase C serine protease (S10) family signature 32 44 IPR001563 GO:0004185|GO:0006508
Spst2g02716 384 PRINTS Carboxypeptidase C serine protease (S10) family signature 45 55 IPR001563 GO:0004185|GO:0006508
Spst2g02716 384 PRINTS Carboxypeptidase C serine protease (S10) family signature 346 359 IPR001563 GO:0004185|GO:0006508
Spst2g02716 384 ProSitePatterns Serine carboxypeptidases, histidine active site. 346 363 IPR033124 GO:0004185
Spst2g02716 384 Gene3D alpha/beta hydrolase 2 382 IPR029058 -
Spst2g02716 384 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 2 363 IPR001563 GO:0004185|GO:0006508
Spst2g02716 384 ProSitePatterns Serine carboxypeptidases, serine active site. 95 102 IPR018202 GO:0004185
Spst2g02716 384 FunFam Carboxypeptidase 42 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02716 Spst-Chr2 27000040 27002789 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02716 244 379 Calmodulin-binding Proteins AT2G22960 30.657 1.87e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02716 K16297 - gmx:100781503 733.021