Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02711 ATGACCAACGCCACCCCACAATGTTACCCTTCAAAACATACCAATCCCATGCATTCCCTCTGTCCTTTTCATTCCAACACCATGACCAAACCAAGAACCCTCAGTCTCACCTTCTTCATGCAAGACATCCAAATTTTGGAGATTTTTCTAGCGGTTCTTGTCTTCGTACTCATTCATGCTCTTAGACAAAAGAAGCATCATGGCCTGGTTGTTTGGCCTGTCCTTGGAATGGTTCCTTCTTTGGTCACAGGACTTAGAACCAACTTGTATGAATGGATCACAGAAGTGCTCAAAAGGCAAAACAGGACATTCAGATTCAAAGGGCCTTGGTTTAGCAACCTCAACTGCATTGTCACTGCTGATCCCCGCAACCTGGAGCACCTTCTCAAAACCAAGTTCCCTCTCTTCCCTAAGGGAGGATACTTCAGGAACACAGTTAGAGACCTACTAGGAGATGGTATATTCGGAGCAGACGATGACACCTGGCAGAAGCAAAGAAAAACAGCAAGCATTGAGTTTCATTCAACAAAGTTCAGAAAATTAACGACAGAATCCTTGCTGGAGCTAGTCCACTGCAGGCTCTTGCCTGTGTTAGAGTCATCGGTTAAGAAATCTGTTGCAATAGACCTCCAAGACATTCTCTTAAGGCTAACTTTTGACAATGTTTGCATGATAGCCTTTGGTGTTGATCCAGGTTGTTTGCGCTTAGGTTTGCCTGAGATACCATTTGCCAAAGCCTTTGAGGATGCAACAGAAGCTACAGTGTTTCGTTTTGTTACCCCCACGTGCGTTTGGAAGGCCATGAGATTTCTTAACCTGGGGGTGGAAAGGAAGCTGAAGAAGTCCATAAAAGGGGTTGATGAGTTTGCTGAGAATGTCATTCGGACTAGAAAGAAGGAACTCTCTTTGCAATGTGAAGACACTAAGCATAGGTCAGATTTGTTAACTGTGTTCATGAGGCTGAAGGATGAGAATGGAAAACCCTATTCGGATAAGTTTTTGAGGGATATATGTGTGAACTTTATATTGGCAGGGAGGGACACTTCTTCGGTTGCTTTGAGTTGGTTTTTCTGGTTGCTTGAACAGAATCCTGAAGTGGAGGAGAATATTCTGGCAGAGATATGCAGGATGGTGAGTCAAAGGAAAGACATAAAGAGGGAAGAGTTTGGTAATTCTTTGATATTCAGGCCAGAGGAGGTCAAGAAGATGGATTATTTGCATGCTGCTTTATCAGAAGCTCTCAGGTTATACCCTTCTGTGCCTGTGGATCACAAGGAGGTAGTCGAAGATGATACATTCCCAGATGGAACGGTACTAAAGAAAGGGACAAAAGTCATCTATGCAATCTATTCAATGGGAAGAATGGAAAGCATATGGGGGAAGGACTGGAAGGAGTTCAAGCCAGAAAGGTGGCTAAGAGATGGGAGGTTCATGAGTGAATCTGCTTACAAATTCACTGCATTCAATGGTGGTCCTCGTTTGTGCTTAGGCAAAGATTTTGCATACTACCAGATGAAATATGCTGCGGCCAGCATCATATTCCGGTACCGTGTGAAGGTGGTGGAGAATCACCCTGTGGAGCCAAAGCTTGCCTTAACCATGTACATGAAGCATGGCTTAAGAGTTAACCTATATAGGAGGGATGTTGCACAAATTCACAAACACTTAGAGGAGGGCTTCAAATAA 1686 0.4389 MTNATPQCYPSKHTNPMHSLCPFHSNTMTKPRTLSLTFFMQDIQILEIFLAVLVFVLIHALRQKKHHGLVVWPVLGMVPSLVTGLRTNLYEWITEVLKRQNRTFRFKGPWFSNLNCIVTADPRNLEHLLKTKFPLFPKGGYFRNTVRDLLGDGIFGADDDTWQKQRKTASIEFHSTKFRKLTTESLLELVHCRLLPVLESSVKKSVAIDLQDILLRLTFDNVCMIAFGVDPGCLRLGLPEIPFAKAFEDATEATVFRFVTPTCVWKAMRFLNLGVERKLKKSIKGVDEFAENVIRTRKKELSLQCEDTKHRSDLLTVFMRLKDENGKPYSDKFLRDICVNFILAGRDTSSVALSWFFWLLEQNPEVEENILAEICRMVSQRKDIKREEFGNSLIFRPEEVKKMDYLHAALSEALRLYPSVPVDHKEVVEDDTFPDGTVLKKGTKVIYAIYSMGRMESIWGKDWKEFKPERWLRDGRFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIFRYRVKVVENHPVEPKLALTMYMKHGLRVNLYRRDVAQIHKHLEEGFK 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02711 561 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02711 561 PRINTS P450 superfamily signature 486 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02711 561 PRINTS P450 superfamily signature 408 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02711 561 PRINTS P450 superfamily signature 495 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02711 561 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 488 497 IPR017972 GO:0005506|GO:0016705
Spst2g02711 561 Pfam Cytochrome P450 71 533 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02711 561 CDD CYP86A 104 540 - -
Spst2g02711 561 PRINTS E-class P450 group I signature 407 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02711 561 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02711 561 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02711 561 PRINTS E-class P450 group I signature 495 518 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02711 561 PRINTS E-class P450 group I signature 485 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02711 561 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02711 561 PANTHER CYTOCHROME P450 58 541 - -
Spst2g02711 561 SUPERFAMILY Cytochrome P450 68 547 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02711 561 Gene3D Cytochrome P450 65 558 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02711 561 FunFam Cytochrome P450 60 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02711 Spst-Chr2 26904287 26906680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02711 38 560 Cytochrome P450 AT5G23190 73.855 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02711 K15402 - gmx:100809503 1033.48