Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02701 ATGATGACAAATGATGGTGCAATGTCTGAAACTGAAAGCCAGTGTAGGTATGACGTTTTCCTTAGCTTTAGTGGTGAAGATACCCGTCACACATTCACTTCTCATCTCTATCATGCTTTGTGCCGGAAGGGAATTCCCACCTTCATGGATGATGGGGAACTTCAGCTTGGAGACCATATTGCTCCTGCGCTTCTCAAAGCCATTCAAGAATCAAGGATCTCAGTGGTTGTTTTCTCTCAAAATTATGCAGATTCTTCATGGTGCCTTGATGAACTTGTCAAGATACACGAGTGTATGAAGTCAAAAAACCAGCTCCTTTGGCCCATCTTCTACAAAGTGGATCCCTCAGACGTGAGGCATCAGAATGGAAATTATGCTAAGGCCATGACTAAGCATGAAAAAAGGTTTGGGAAAGACTCTGAGAAGGTGCTCCAATGGAGGTCAACCTTGACTCACATTGCCAACTTGAAAGCACTACAAGAAAATCGCTTCAATGCTGTTAGGAGGGACGAATCCAAGTTTATTGATGATCTTGTTAGCAAGATTTTCATTAAATTATCTCCTAAAGATTTGTCAAGTGATGAGCATATAGTAGGACGGGAGGATCGAGTTGAAGAATTGAAATCACTTCTAGATCTTGAGAATCATAATATCACTTGCCTGTTGGGGATTCATGGAACAGGTGGAATTGGAAAAACCACACTTGCCAAAGCTTTGTACGACTCCGTTTACAATAAGTTTGAGGGTTCAAGTTTTCTCTCCCACGGATTAAAACATCTGCAAGAAAGGCTTCTAACAGATATACTTGAGGTCAGCAAAATTAAGTTGAGAAGTACTGAAGATGGAATCAAAACAATAAAAAGTAGACTTGGCTTTAAAAGAGTTCTTATAGTTCTCGACGATGTTGATAACATTGAACAGTTGAATAATTTGATAGGGAGAGAAGTTTGGTTTGGTCATGGGAGTAGGATCATCATAACCACAAGAGATAAACATTTGCTAGATCTTGGTCAGGTTAACAACAGATATGAAGTGAAAGTGCTAAACGACCAAGAGTCTCTAGAACTCTTCTGTCAGAGTGCCTTCAGAAAAAGCTTTCCTGAAACAAACTATGAATATCTGTCCAATCGTGCAATGCGATGTTGCAAAGGCCTTCCATTGGCCTTAAATGTGCTGGGCTCTCATTTGGTTGGAAAAGATTTTGATGGATGGAAGGATGCACTTGATAGATATGAAAAGAGTCCACATGAAGATGTCCAAAAAGTTCTTAGAATAAGCTATGATAGTCTTGCTCCCAATGAGAAGAATATATTTCTTGATATCGCGTGCTTCTTCAAAGGACATAGATTGGAATACATAAGGAGAGTACTAGATGCGTGTGACTTCAGCTCAGGAGATGGTATCACAACACTAGTCAATAAATCTTTGTTAAGTATTGACAACAATTGCTTAGGGATGCATGACCTAATGCAAGCAATGGGCAGAGAAATTGTTAAGGAGGAAGCGTGGAATGAAGTTGGCGAACGCAGCAGATTATGGAATCATGAAGATGTTCTTCAAGTACTACTTGATGATAATGGAAGTAGCAAAATTCAAGGAATAATGCTTGATGGGCATCAACGAGAAGAAGAAATTACTTGTGTTGTTGATACTGTATTTGAAAAGATGAAGAATCTCAGAATTCTCATTGTTTGCAACTCAAGCTTTTCACTTGAGCCGAGTTTTCTCCCAAATAATTTAAGGCTTCTTGATTGGAAATATCCTTCACAGTCTTTCCCTTCAGGTTTTTATCCCAGGAAAATTGGATCCTTTAATTTAAGTGGAAGTCCTCTACTCGTGCTAGAAAAGCCATTTCAGGTACAATTGCTTGATCTAATCTCGCAGATGATTGTTGTTACATTTCAGTATTTGGCATACATGAATATCTCCTATTGTCCTATGGTTACTGAATTTCCTGATGTGTCTGGCGCCATGAATTTAAGAGAACTAAGACTTGATGGATGCCAGAAACTGGTTAGCATTCATAAATCAGCAGGTTATCTGGTTAACCTAGTTCTCCTAAGTGCTTCAGGATGCTATCAACTCCCAAGTTTTGTGCCAACAATGTATTTGCCATCTCTCCAATACCTTTCCTTCGAACTTTGCTCAAGACTAGCACACTTCCCAAAGATCGATGGAACCATGGATGAGTCATTAGAGATTAATATTTCATATACAGATCTTAAGGAGCTTCCAGAATCCATTGAAAAACTCGTTGGGCTTAAGTATCTTGACATGACAGATTGCAAGGGACTTCAACATTACCAACTTCGAAAAATTCCTGAGCTGCCATCAAGTGTTGAGAAAGTAGATGCAAGAGAATGCAAATGCTTAACTTCCCAGACATCAAACATCTTATGGTGTCAGGTGCGTAAAGAGATAAAGAGATTAAAAGTGAAGATGCCACACACGGAGATTCCAGAGTGGTTCGACTATGTTAACAATGGAGGGTATCCAGTTATCAAGGCTCGTGGGAAGTTCCCTGTGATTGCTTTAGCGTTTGTGTTCAGGGACGTGAATGCCAAGGATAGTGATCTATTTGCAGCTGATTACCAAGCTGTTGGCATGGAGTTGTTCGTTGAGGGTAAACGCAGACGCTACAATAATTTCACTCTGGCAGAGAATCATGTGTTTTTGTGTGACCTACGAGTTTTGTTCAGTTTGGGGAAGTGGGAGGATGTAGGTGTTGGAGGTGGTAATGATTGGAAGACCATAAAGATTTACTGTAAAACAGAGATGATTCTGTGTTCACGGGGAGTTTATGTGTACAAGCATGAGACAAACATGGAGGATATTCAGTTCACAAGTCAACGTTCCTGTTCCTATTTGGTTCGAAGGCTTGACACATTTAATGCAGCAAGGAGTAAGAAACAAAGTTTGAAATGGCAAGACACATATCTAGAGCATGATAGGAAAATCAGAAGTGTTCATGAGTTGAACCGTTTACTAGGCATACAAAGCAGCCCTGAAGGAACTTCGGTGGACAAGGACCACGATTCACAGTGGGAGGAGTTGACTGATGACTACTACTTCCATGATGATGATGATGATGATGGAAAGAGTCAAGAAACTGGCCATTCAGAGGATGATGAGGAAGAGTCAGGGTCAGCGTGCAGGTCTGGAAAAAGGATGAGAAGATGTTGA 3183 0.4025 MMTNDGAMSETESQCRYDVFLSFSGEDTRHTFTSHLYHALCRKGIPTFMDDGELQLGDHIAPALLKAIQESRISVVVFSQNYADSSWCLDELVKIHECMKSKNQLLWPIFYKVDPSDVRHQNGNYAKAMTKHEKRFGKDSEKVLQWRSTLTHIANLKALQENRFNAVRRDESKFIDDLVSKIFIKLSPKDLSSDEHIVGREDRVEELKSLLDLENHNITCLLGIHGTGGIGKTTLAKALYDSVYNKFEGSSFLSHGLKHLQERLLTDILEVSKIKLRSTEDGIKTIKSRLGFKRVLIVLDDVDNIEQLNNLIGREVWFGHGSRIIITTRDKHLLDLGQVNNRYEVKVLNDQESLELFCQSAFRKSFPETNYEYLSNRAMRCCKGLPLALNVLGSHLVGKDFDGWKDALDRYEKSPHEDVQKVLRISYDSLAPNEKNIFLDIACFFKGHRLEYIRRVLDACDFSSGDGITTLVNKSLLSIDNNCLGMHDLMQAMGREIVKEEAWNEVGERSRLWNHEDVLQVLLDDNGSSKIQGIMLDGHQREEEITCVVDTVFEKMKNLRILIVCNSSFSLEPSFLPNNLRLLDWKYPSQSFPSGFYPRKIGSFNLSGSPLLVLEKPFQVQLLDLISQMIVVTFQYLAYMNISYCPMVTEFPDVSGAMNLRELRLDGCQKLVSIHKSAGYLVNLVLLSASGCYQLPSFVPTMYLPSLQYLSFELCSRLAHFPKIDGTMDESLEINISYTDLKELPESIEKLVGLKYLDMTDCKGLQHYQLRKIPELPSSVEKVDARECKCLTSQTSNILWCQVRKEIKRLKVKMPHTEIPEWFDYVNNGGYPVIKARGKFPVIALAFVFRDVNAKDSDLFAADYQAVGMELFVEGKRRRYNNFTLAENHVFLCDLRVLFSLGKWEDVGVGGGNDWKTIKIYCKTEMILCSRGVYVYKHETNMEDIQFTSQRSCSYLVRRLDTFNAARSKKQSLKWQDTYLEHDRKIRSVHELNRLLGIQSSPEGTSVDKDHDSQWEELTDDYYFHDDDDDDGKSQETGHSEDDEEESGSACRSGKRMRRC 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02701 1060 Pfam NB-ARC domain 200 431 IPR002182 GO:0043531
Spst2g02701 1060 Pfam TIR domain 17 192 IPR000157 GO:0007165
Spst2g02701 1060 SUPERFAMILY "Winged helix" DNA-binding domain 418 522 IPR036390 -
Spst2g02701 1060 MobiDBLite consensus disorder prediction 1028 1053 - -
Spst2g02701 1060 Gene3D - 347 431 IPR042197 -
Spst2g02701 1060 PRINTS Disease resistance protein signature 221 236 - -
Spst2g02701 1060 PRINTS Disease resistance protein signature 289 303 - -
Spst2g02701 1060 PRINTS Disease resistance protein signature 749 765 - -
Spst2g02701 1060 PRINTS Disease resistance protein signature 382 396 - -
Spst2g02701 1060 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 788 IPR044974 GO:0006952
Spst2g02701 1060 SMART till_3 16 156 IPR000157 GO:0007165
Spst2g02701 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 441 IPR027417 -
Spst2g02701 1060 Gene3D - 10 184 IPR035897 -
Spst2g02701 1060 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 156 IPR035897 -
Spst2g02701 1060 ProSiteProfiles TIR domain profile. 15 186 IPR000157 GO:0007165
Spst2g02701 1060 FunFam Disease resistance protein (TIR-NBS-LRR class) 349 431 - -
Spst2g02701 1060 SUPERFAMILY L domain-like 545 796 - -
Spst2g02701 1060 Gene3D Ribonuclease Inhibitor 523 823 IPR032675 -
Spst2g02701 1060 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 187 - -
Spst2g02701 1060 Gene3D - 185 340 IPR027417 -
Spst2g02701 1060 MobiDBLite consensus disorder prediction 1022 1060 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02701 Spst-Chr2 26769102 26774166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02701 17 783 WRKY Transcription Factor Family AT4G12020 30.534 1.21e-90 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02701 - - gmx:100801890 1034.25