Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02684 ATGCTTCTGGTTAAGAATGCTATTCAGGAAACCCATTATGAAGTTCTCAATGTCAAAGAAGATGCAAATTACGAAGAAATTCGTGCTAGTTACCGCAGTGCTGTACTCAGCTTACATCCTGATAAGCTGTTGAAGACGTCAGAGACATGCAGTAGTAATCAAATAGATGCAGAGAGATTTCTCAAGGTACAGAAGGCATGGGAAATTCTAGGTGATTCAGGGTCTCGCTCGTTTTATGATACTGAGCTGCGAAGCACAAGGCAGGATTTCTTGGCTGCCGAAGTTGCTGAAGATTTGAGCATAGACGATATGATGCTTGAAGATGGTGGAGAAGCATTGGAACTGTTCCATCAATGTCGATGTGGTGATTACTTCTCTGTAGACTCATTGGAATTGAAGAAAATGGGATATACCTTATTGAGGGAGGGAAGTGAGATATCTATGCTCAATGATGATACTTTACCAGGATCAGTGATTCTTCCATGTGGATCTTGCTCGTTAAAAGCTCGTCTGCTAATCAATATTTTATGA 531 0.4087 MLLVKNAIQETHYEVLNVKEDANYEEIRASYRSAVLSLHPDKLLKTSETCSSNQIDAERFLKVQKAWEILGDSGSRSFYDTELRSTRQDFLAAEVAEDLSIDDMMLEDGGEALELFHQCRCGDYFSVDSLELKKMGYTLLREGSEISMLNDDTLPGSVILPCGSCSLKARLLINIL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02684 176 SUPERFAMILY Chaperone J-domain 10 84 IPR036869 -
Spst2g02684 176 FunFam DNAJ heat shock N-terminal domain-containing protein-like 89 176 - -
Spst2g02684 176 PRINTS DnaJ domain signature 13 31 IPR001623 -
Spst2g02684 176 PRINTS DnaJ domain signature 55 75 IPR001623 -
Spst2g02684 176 PRINTS DnaJ domain signature 31 46 IPR001623 -
Spst2g02684 176 ProSiteProfiles dnaJ domain profile. 11 83 IPR001623 -
Spst2g02684 176 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 95 174 IPR007872 -
Spst2g02684 176 SMART dnaj_3 10 75 IPR001623 -
Spst2g02684 176 Gene3D DnaJ domain 2 88 IPR036869 -
Spst2g02684 176 PANTHER DPH3 HOMOLOG-RELATED 11 173 IPR044248 GO:0017183|GO:0046872
Spst2g02684 176 Pfam DnaJ domain 11 80 IPR001623 -
Spst2g02684 176 Pfam CSL zinc finger 98 172 IPR007872 -
Spst2g02684 176 CDD DnaJ 11 72 IPR001623 -
Spst2g02684 176 SUPERFAMILY CSL zinc finger 96 174 IPR036671 -
Spst2g02684 176 Gene3D DPH Zinc finger 89 176 IPR036671 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02684 12 81 C2H2 Transcription Factor Family AT1G74250 39.726 1.46e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02684 K17867 - gmx:100814856 290.812