Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02674 ATGGTAGTGATCATGCAACAGCAACAGCAACAGCAGAACCCTTCTGCACTGGTGCCACTCCTAAAAAATCCCCAATCCTCCGCCACCACCGTCGCCTCTGCCACCACAACCACTGCCGCCATTTCCATTAGGTCACCTTCCTCGCAGTCGCCACTCTCCGTCGTCGCTCCCCTCCGCCAGCCCCCACTCTCCTCGCATCCGGTGCCAGTTACGGCGGTGGAGCCCGCTTTGACGGCGGTGCCGACGTGTCCGCTGGTGAGAGTCCGCCTCTCGGACATTGCCCCCTATGACGGGGCGCCGGCGGGGCCTTATCTGAAAGCAATGGAGGCTCTGTGCGGGTCTTTGCTGCGGCACAATGCGGCGTTGATCGAATTGGGGAGCGAAGACACTGCTCTGATGCGATGCGGCTTGGAAGGTGCAAGGTTGTTTTTCAGAAGTAGGGCCCAGCTTGGTGTTGGGAAGGGTAGCCGTGGGGTTTACATGTACAGAGCAGGAAGGGCTTTGGAGGATTGGGATTATTCTCCCCCCTGCATGGCTGATATTTTTAGGTGCATGGGAAAGGCATCTCGATCTGCTTTGAGTGCCATTGCAAGATATTTACGTCTTAGAAGCGATGTTTTTAACCATTTGCTTGATGATGCACCGTTGCCTGCTAATGAGGTGTCTTCGTCAGTTCTTGTTGCTACATATTCACATTCTTCTTTGCAAAATGGAAGAGGTGCCATTGGAGGCGGAAAGCCTACCATGAATGGTGAAGTTGAGAAGGGATTGTTGACATTGATATCCTCTGACACTCCTGGTCTTCAGATATGTGACCCCAGTGGTCGCTGGTATCTGGCAGACAGTGGTTCTGGGCCTGGAGATCTTTTACTGATAACAGGCAAGGCACTTGGCCATGCTACTGCTGGCCTACGTCCTGCTGCATCATATAGAGCTTCTCCTGATTATTTTCTGAGTCCTAATGGTGGAGGAAGGACTTCTCTTGCATATAGACTCATGCCACAGGGAAATGCTATATTAGATTGTTCCCCAATTGCAGCAGCTGGCCATGTTATTCCCCAAAGCTATGTTCGAATATCTGTAAGCCAATTTATGGACGACCTTGCTGCTGAAGAATTGATAGGCAGCAGATGTGATAATGCTGATGTTGCTGCTCAAAACAGTATGAATAAGGAGCCATCGTTAAGAAGTGTTCTATCAGATCCTTTATCTGGCACATTCCTTGAAGATGCCATGTTTGTCTCATGTGGACATTCTTTTGGTGGTCTCATGTTGAGGAGAGTCATTGAAACATCCAGATGTACTCTCTGCAATACAGAAATTGAAGCTGGTTCTTTGATCCCTAATCTTGCTCTTAGAGCTGCTGCTGCTGCTGTCAAGCATGAGGATGAACGGAGGTTATTTCGTAATGCTGCCCTCCGAAAGCGGCGGAAAGAAATGGGTGATCAAATGGATTCAATGAGAAGAGTGAATAGGGAAAATGGAGATTATACTGCTGTTGATGGACTTCAGCGGGGAGTACAATATCCATTTTCGGTAAATGAGAAAGTTATTATTAAGGGTAACAGAAGAACACCCGAAAAATTTGTTGGGAAAGAAGCTGTGATTACATCTCAGTGTCTCAATGGCTGGTATTTGCTCAAGATTATTGAAACTGGAGAGAATGTCCGCCTGCAGTACCGTTCTCTTAGGAAGCTTTTAAACTCATCAGCAGACCAGTGTCCCTCACAACCAATTCAAAATAGCAGCTCTTAA 1755 0.4838 MVVIMQQQQQQQNPSALVPLLKNPQSSATTVASATTTTAAISIRSPSSQSPLSVVAPLRQPPLSSHPVPVTAVEPALTAVPTCPLVRVRLSDIAPYDGAPAGPYLKAMEALCGSLLRHNAALIELGSEDTALMRCGLEGARLFFRSRAQLGVGKGSRGVYMYRAGRALEDWDYSPPCMADIFRCMGKASRSALSAIARYLRLRSDVFNHLLDDAPLPANEVSSSVLVATYSHSSLQNGRGAIGGGKPTMNGEVEKGLLTLISSDTPGLQICDPSGRWYLADSGSGPGDLLLITGKALGHATAGLRPAASYRASPDYFLSPNGGGRTSLAYRLMPQGNAILDCSPIAAAGHVIPQSYVRISVSQFMDDLAAEELIGSRCDNADVAAQNSMNKEPSLRSVLSDPLSGTFLEDAMFVSCGHSFGGLMLRRVIETSRCTLCNTEIEAGSLIPNLALRAAAAAVKHEDERRLFRNAALRKRRKEMGDQMDSMRRVNRENGDYTAVDGLQRGVQYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIETGENVRLQYRSLRKLLNSSADQCPSQPIQNSSS 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02674 584 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 394 464 IPR013083 -
Spst2g02674 584 SUPERFAMILY Clavaminate synthase-like 177 344 - -
Spst2g02674 584 Gene3D - 167 373 IPR027443 -
Spst2g02674 584 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 83 581 - -
Spst2g02674 584 SUPERFAMILY RING/U-box 395 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02674 Spst-Chr2 26302717 26312801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02674 395 581 Plant U-box Gene Family AT5G05230 39.362 1.53e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02674 - - gmx:100807199 1017.3