Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02656 ATGGCTTCCCTCTATGAAGTGCTTGGAATTTCAGTTGGTGCAAGCTGCGTGGAAATAAAGGCTGCTTACAGAAAGCTCGCAAGAACTTACCATCCTGACGTTGTGGCCATGAATCAGAAGGAAAGTTCAGCTCACCAATTCATGATGATCCATTCAGCTTACTCAACGTTGTCTGACCCAGAGAAGAGAGCTGAGTATGACAGAGAAATCTATAGATACAAAAGATCAGCAAAGATGGCTTCCATGGCAGGAAGAAATCAGACATTTTCCTGCACTGGAGGAAGTGGGAGGAAATGGGAAACGGACCAATGTTGGTAG 318 0.4497 MASLYEVLGISVGASCVEIKAAYRKLARTYHPDVVAMNQKESSAHQFMMIHSAYSTLSDPEKRAEYDREIYRYKRSAKMASMAGRNQTFSCTGGSGRKWETDQCW 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02656 105 SUPERFAMILY Chaperone J-domain 2 79 IPR036869 -
Spst2g02656 105 ProSiteProfiles dnaJ domain profile. 3 70 IPR001623 -
Spst2g02656 105 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Spst2g02656 105 PRINTS DnaJ domain signature 5 23 IPR001623 -
Spst2g02656 105 PRINTS DnaJ domain signature 23 38 IPR001623 -
Spst2g02656 105 PRINTS DnaJ domain signature 42 62 IPR001623 -
Spst2g02656 105 PRINTS DnaJ domain signature 62 81 IPR001623 -
Spst2g02656 105 Pfam DnaJ domain 4 67 IPR001623 -
Spst2g02656 105 SMART dnaj_3 2 62 IPR001623 -
Spst2g02656 105 CDD DnaJ 5 59 IPR001623 -
Spst2g02656 105 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 2 105 - -
Spst2g02656 105 Gene3D DnaJ domain 1 89 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02656 Spst-Chr2 26155987 26156304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02656 5 67 C2H2 Transcription Factor Family AT1G74250 46.269 5.07e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02656 - - gmx:100798520 180.644