Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02633 ATGGCAGTTGAAAAGAGGTTTGTTTTGGTGGGGATTAAAATAGATGACCTTTGTAAACAGCTTGTCAACTGGGCACTTGTCAAAGTTGCAGAACCAGGGGATTGTGTTGTAGCAGTTCATGTTGTTAAAAATCCAGATCATGTTTGCAAGAGCAAGACTATGATTGATGACTATTTAGAAATTTATGAAGGGCTATGTGATGTTAAGAAGGTAGATCTCACTGGTCAAATCTTTTATGGAAGCTCCATTCGAAACATTCTTGTTAGAGAAGCAAAAAAGCATACAGCTCTGGCTCTAGTGGTAGGGGGTCGAGCTGGCACAGCTAAATATTGCGCCAAACGACTACCACCCACCACGAATGTTCTAGCCATCCGAGACTCAAGGATTGTCTATAGGAGGTGCACCAATAAACAACTACCAGGTGGTCTTATAATGGATCCAAGACCAAGCTTAACAATCATAGGAGAAAACTTGAGTGACATATTAAACCAGTCCACATTTGGTGACTCCACTGTTGAGATTGAGAAATCAGCAAGCAAAAATTCATTAGAGTTGAAGGAAGAAGCATCTGACGGATTAGAAATGTGTAAGTCAAGGTCAACATCCATGCTTTCTGGTGATTCAGCTGAGCAGAAGCTTGGGTGGCCTCTACTACGCCGAGCCAATTCAGGAATGTCACAAACTCATCAAGCAAGGGACATGTCAGTAGTACAATGGGTAATGACCTTACCAGATCGTTCACCAAATAAAAGTCCTTGCTCTTCTTCCTCTGAGGAAAATCCATTTGAAAGGAGCATCAGCGATATTGATGATGAGAGCTCTAAAATTTCTTCAGCTCCATCTGTTGAGCTACCAAATGGCCTAGAGGAGATGCTAAACGTACATTCAATCGACTGCAAGTGGTTCAGCCTTGAAGTTCTGCAGTCTTGCACTAGACAATTTTCTTCAGAAAACTTGGTTGGGAAAGGAGGGAGCAATCGTGTGTACAAAGGAGTCCTCCCTGATGGAAAACCGGTGGCAGTTAAAGTATTGCAGTCATCAAAAGAAGCGTGGAAAGATTTCGCCCTTGAGGTGGAAATAATATCCTCATTGAAGCACAAGAGCATTACCCCTCTACTTGGGATTTGCACAGAGAACAATACTTTAATCTCGGTTTATGATTATATCCCCCAAGGCAGCTTAGAGGAAAATCTGCAGGGAAAGAGCAAATTGTCATGGGAAATGAGATTTAATGTGGCAGTTAGGATCGCTGAAGCTCTTGATTACCTGCACAGCGAAGCTTTGAAGCCTGTTGTCATACATAAAGATGTCAAGTCGTCTAACATTCTTCTATCTGAAGGGTTTGAACCTCAGTTATCTGATTTCGGACTTGCAATATGGGGACCAACAACTTCATCCATTTTTACCCAAGATGTAGTAGGAACATTTGGTTATCTTGCTCCTGAATACTTCATGTATGGAAAAGTCAGTGACAAGATAGATGTTTATGCCTTTGGTGTAGTTCTACTTGAACTAATAACAGGAAGGGAACCAATCAGCTCAGCATCTTGCAAAGGACAGGAGAGCTTGGTCGTGTGGGCAAAACCAATAATAGACAGTGGGGACATTAAAGGCTTATTGGACCCAAATTTAGAAGGGAAATTTGATGAGGTCCAATTGCAAAGAATGGTTCTGGCAGCATCTTTATGCATCACACGGTCTGCTCGACTTCGTCCTAAACTGAATCAGATACTGAAGATCCTAAAAGGAGATGAGAAAGATGAATATTTCCTCAACTCGCATGGGAATGATGAGGAGGATTCAGAAAATGGAGAAAACATAGATGATGAAGTGTATCCAAGTTCAAGTGCTGAGTTACACCTGAGTCTTGCATTACTTGGTGTGTTGGATGACAGAACGTCACAAACTAGCACTGAGCTGAGCTATAGTGAGCACTTGAAAGAACAATGGAGCAGGTCATCAAGTTTTAATTGTTAG 1977 0.4173 MAVEKRFVLVGIKIDDLCKQLVNWALVKVAEPGDCVVAVHVVKNPDHVCKSKTMIDDYLEIYEGLCDVKKVDLTGQIFYGSSIRNILVREAKKHTALALVVGGRAGTAKYCAKRLPPTTNVLAIRDSRIVYRRCTNKQLPGGLIMDPRPSLTIIGENLSDILNQSTFGDSTVEIEKSASKNSLELKEEASDGLEMCKSRSTSMLSGDSAEQKLGWPLLRRANSGMSQTHQARDMSVVQWVMTLPDRSPNKSPCSSSSEENPFERSISDIDDESSKISSAPSVELPNGLEEMLNVHSIDCKWFSLEVLQSCTRQFSSENLVGKGGSNRVYKGVLPDGKPVAVKVLQSSKEAWKDFALEVEIISSLKHKSITPLLGICTENNTLISVYDYIPQGSLEENLQGKSKLSWEMRFNVAVRIAEALDYLHSEALKPVVIHKDVKSSNILLSEGFEPQLSDFGLAIWGPTTSSIFTQDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELITGREPISSASCKGQESLVVWAKPIIDSGDIKGLLDPNLEGKFDEVQLQRMVLAASLCITRSARLRPKLNQILKILKGDEKDEYFLNSHGNDEEDSENGENIDDEVYPSSSAELHLSLALLGVLDDRTSQTSTELSYSEHLKEQWSRSSSFNC 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02633 658 Gene3D Phosphorylase Kinase; domain 1 280 388 - -
Spst2g02633 658 PANTHER OS08G0249100 PROTEIN 191 594 IPR046958 -
Spst2g02633 658 MobiDBLite consensus disorder prediction 245 281 - -
Spst2g02633 658 Gene3D Transferase(Phosphotransferase) domain 1 389 605 - -
Spst2g02633 658 FunFam Putative receptor-like serine/threonine-protein kinase 389 597 - -
Spst2g02633 658 ProSiteProfiles Protein kinase domain profile. 314 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02633 658 Pfam Protein kinase domain 316 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02633 658 MobiDBLite consensus disorder prediction 245 262 - -
Spst2g02633 658 SUPERFAMILY Protein kinase-like (PK-like) 295 581 IPR011009 -
Spst2g02633 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Spst2g02633 658 SMART serkin_6 314 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02633 658 CDD USP_Like 8 104 - -
Spst2g02633 658 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 283 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02633 Spst-Chr2 25931165 25934432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02633 302 587 Trihelix Transcription Factor Family AT1G70460 43.729 5.23e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Spst2g02633 Pkinase 3.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02633 - - gmx:100789189 1031.55