Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02622 ATGTTGGTTCTCTTCTCATCTCCAAACACTGTTTCAGAGCTACCAATCAGCTGTGGTCAAGTCACAGGATACAGCTATATGAATGCACAAGCATTAGATTTCTCCATTGCTGATGTATTTGAGTTCAAGTGGGTAAAACTGTTGCCCATTATCGCAGATGGTGGGACATCATTTTCTGCAGCCAAAGCAACTCGCAAGCGACTTGAAGTCCCAAAAGGCTATCTTGCAGTCTATGTTGGAGATAAGATGAGGCGGTATGTGATTCCTGTATCATTCTTAAATCAACCTTCTTTTCAACAATTACTAAGTCGAGCAGAAGAAGAGTTTGGATATGATCATCCAGCTGGTGGTCTTAAAATTCCGTGTAAAGAGGATGAGTTTCTAAACCTCACTTCTCTCTTGAAAGAGCTCATCCTTATTGCATATTTCATTATATCATCTCTACAAGGGATTGTTGAGGCCATCCGTTGTATTGTCAAATCCAAATTCTTGTTCAACTTCACTCAGCAGGTCTTTGAATTGAAGCCCTTTGGGACATCAAGGCAAACAGAAACCATTGCAGATCAAGAGAATGATTTGAAGAAGACTTGTCAATTCGAACCAAGTCTTACATTCCATCACTTAATATCTTTACCCTTTGGTTCATATCTAGCTTTCTCCATCATGAAGACTGGTAACAGATTTGTGGGGATAGCTAATGCCAAGCAGAAACTTCAGAGAACTCTTTCACAAAGAATCAAAATGGCTTCAGCTGTTGCTGATGTTCCAAAAGGGCATTTGGCAGTTTACGTTGGAGAGAACTATAAGAGGTTTGTGATTCCAATATCTTACCTAAGCCACCCTTTGTTCAGAGACTTGCTGGATTGGGCTGAAGAAGAATTCGGATTCAACCACCCAATGGGTGGTCTCACTATTCCTTGCACTGAACATTACTTCATCACTCTAACTTCTTCTCTTAATTGA 963 0.4029 MLVLFSSPNTVSELPISCGQVTGYSYMNAQALDFSIADVFEFKWVKLLPIIADGGTSFSAAKATRKRLEVPKGYLAVYVGDKMRRYVIPVSFLNQPSFQQLLSRAEEEFGYDHPAGGLKIPCKEDEFLNLTSLLKELILIAYFIISSLQGIVEAIRCIVKSKFLFNFTQQVFELKPFGTSRQTETIADQENDLKKTCQFEPSLTFHHLISLPFGSYLAFSIMKTGNRFVGIANAKQKLQRTLSQRIKMASAVADVPKGHLAVYVGENYKRFVIPISYLSHPLFRDLLDWAEEEFGFNHPMGGLTIPCTEHYFITLTSSLN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02622 320 Pfam Auxin responsive protein 59 134 IPR003676 GO:0009733
Spst2g02622 320 Pfam Auxin responsive protein 243 318 IPR003676 GO:0009733
Spst2g02622 320 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 245 319 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02622 Spst-Chr2 25831861 25839636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02622 254 312 Calmodulin-binding Proteins AT5G20810 64.407 7.57e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02622 K14488 - gmx:100781277 196.438