Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02612 ATGGGTTTCCATTTACATGGTATCCGAAGGTCATCATTCACAAGTAGCCAAGCAGCTGCAAAAGTACCAAAGGGCTATCTTGCGGTATATGTTGGAGAGAAGCACAAGCGGTTTGTGATTCCCATATCATATTTGTACCAACCTTCATTCCAATACTTGCTTAGTCAAGCTGAAGAAGAGTTCGGACATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGCGAAGATGTCTTTGAACGTACAACTTCTGGCTTGAAGGGACAATAA 270 0.437 MGFHLHGIRRSSFTSSQAAAKVPKGYLAVYVGEKHKRFVIPISYLYQPSFQYLLSQAEEEFGHDHPMGGLTIPCSEDVFERTTSGLKGQ 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02612 89 Pfam Auxin responsive protein 14 83 IPR003676 GO:0009733
Spst2g02612 89 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 15 84 IPR003676 GO:0009733
Spst2g02612 89 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02612 Spst-Chr2 25806330 25806599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02612 9 80 Calmodulin-binding Proteins AT3G43120 47.222 8.82e-18 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02612 K14488 - gmx:106795238 137.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02612 2 25806330 25806599 Spst2g02612 2 25806330 25806599 ECH