Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02611 ATGGGTATTCGGTTAGCTGGTATCAGAAAGGCATCACGTTCTGCGATACAAGGATCGTCAAAAGTCTTGGATGTGCCGAAGGGCTACCTTGCAGTCTATGTTGGAGAGAAAATGAAACGGTTTGTGATCCCCGTATCATACTTGAACCAACCTTCATTTCAAGATTTGTTGAATCTAGCCGAGGAAGAATTCGGGTATGACCATCCAATGGGCGGTCTCACAATTCCTTGCAGAGAAGAGGTGTTCTTAGACACCACATCTCGCTTGAATAGAGAAACCATGGGTTTCCGTTTACTTGGTGTTAGAAGAGCAAGACAAGCTGCATCAAAGGGAGAAGAGGTCCCGAAAGGGTATCTTGCAGTGTATGTTGGGGAAAAAATGAAGCGGTTCATGATTCCAATTGGATACTTGAACCAACCTTCATTTCAGGACTTGCTAAGCTTAGCAGAGGAAGAATTTGGATTCCATCATCCCATGGGTGGCCTTACAATTCCTTGCAGAGAAGATGTCTTCGTAAATATCATGTCAGCTTTCTCTTGA 540 0.4407 MGIRLAGIRKASRSAIQGSSKVLDVPKGYLAVYVGEKMKRFVIPVSYLNQPSFQDLLNLAEEEFGYDHPMGGLTIPCREEVFLDTTSRLNRETMGFRLLGVRRARQAASKGEEVPKGYLAVYVGEKMKRFMIPIGYLNQPSFQDLLSLAEEEFGFHHPMGGLTIPCREDVFVNIMSAFS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02611 179 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 15 89 IPR003676 GO:0009733
Spst2g02611 179 Pfam Auxin responsive protein 106 176 IPR003676 GO:0009733
Spst2g02611 179 Pfam Auxin responsive protein 17 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02611 Spst-Chr2 25803295 25805500 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02611 3 82 Calmodulin-binding Proteins AT3G43120 46.250 1.21e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02611 - K14488 pcin:129286196 237.269