Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02609 ATGGGTTTCCGCATCCTAGGTATTATTAGACTAGCATCATTATCTACTGCTAAAACAACTCGCAAGGGACTTGAAGTCCCAAAAGGCTATCTTGCAGTCTATGTTGGAGATAAGATGAGGCGGTTCATGATTTCAGTATCATACTTGAACCAACCTTCATTTCAACAATTACTAAGTCAAGCAGAAGAAGAATTTGGATATGATCATCCAACTGGAGGTCTCACAATTCCATGCAAAGAGGATGAGTTCCTAAACGTTATCTCTCACTTGAATGAGTAA 279 0.3907 MGFRILGIIRLASLSTAKTTRKGLEVPKGYLAVYVGDKMRRFMISVSYLNQPSFQQLLSQAEEEFGYDHPTGGLTIPCKEDEFLNVISHLNE 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02609 92 Pfam Auxin responsive protein 17 89 IPR003676 GO:0009733
Spst2g02609 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 20 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02609 Spst-Chr2 25799486 25799764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02609 15 83 Calmodulin-binding Proteins AT3G43120 49.275 3.08e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02609 - K14488 vum:124825808 167.162