Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02602 ATGGCCATTAGAAAATCAAACAAGCTTCCCCAACATGCAGTTTTGAAGCAGATCCTTAAGAGGTGTTCAAGCCTAGGAAAGAAAAACGGGTACGATGATGATGGCCACCTTGTTGATGTCCCAAAAGGCCATTTTGCTGTTTATGTCGGCGAAAACAGAAGCAGGTACATTGTGCCAATCTCATTCCTCGCTCACCCTGAGTTCCAATCCCTCCTTCGACAAGCGGAAGAAGAGTTTGGCTTCGATCACGAGATGGGTCTCACCATTCCTTGCGAAGAAGTCGTCTTCAGGTCTCTAACATCATCGTTGAGATGA 315 0.4635 MAIRKSNKLPQHAVLKQILKRCSSLGKKNGYDDDGHLVDVPKGHFAVYVGENRSRYIVPISFLAHPEFQSLLRQAEEEFGFDHEMGLTIPCEEVVFRSLTSSLR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02602 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 38 103 IPR003676 GO:0009733
Spst2g02602 104 Pfam Auxin responsive protein 34 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02602 Spst-Chr2 25783463 25783777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02602 39 99 Calmodulin-binding Proteins AT3G43120 57.377 2.17e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02602 K14488 - gmx:100790342 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02602 2 25783463 25783777 Spst2g02602 2 25783463 25783777 ECH
Spst2g02602 2 25783463 25783777 Spst3g03804 3 88021514 88021828 ECH