Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02600 ATGGGTGAAAATGAAGAAGCGACGAATGACATGATGCAGAGGCTACACTGTTCTTCTTCGTTTCTGAGACAGCCGTTGAACATGGAGCAACTCAGCATCCCGCAATTCAACCCCTCGCAAATGCGCGCACGGCATCCGCATCAGCATCAGTTCGACGGTGGGAACAGTAACAAGCGCGCGGGTATACCACCTTCGCACCCGCACCAGATCCCGCCCATTTCGCCCTACTCTCAGATCCCGGTGACGCGTCAGCAGCAAATGGGGTCGCTCAACATTTCCCCTACACCCACCCACACGCGATCACTCTCGCAACCTTCCTTTTTCTCCCTGGATTCTCTCCCTCCCCTCAGCCCTTCCCCCTTCCGCGACTCTTCCTCTACCTCCGTCTCCGAAGCTGCTGACGTGTCCATGGAAGATCGTGACGTCACTTCTCATTCCCTCTTGCCACCCTCACCTTTCGCCAGAACACTCAACACCTCAAACAACAGCAATTTGCCTTTACCCCCTCGAAAAGCGCATAGACGCTCTAACAGTGATATTCCGTTTGGGTTTTCCACCGTTTTGCAATCTTCGCCACCGCTTATTCCTCTCCGGGGCAGAGAAAACCCCGTTTTGGCGAAACCTGCTCAGTTGGTCAAAAGAGAAACACCGTGGGACAGGGGTGTTGACCACAGTAATGTAGAGGGATCCGGGGAGAAGAAATCCCCTGAAGGGGAAGTGGTGGATGATCTTTTCTCTGCTTACATGAATTTGGATAGCTTTGATGCGTTGAACTCTTCTGGAACCGATGATAAAAACGGGACTGAAAATCGCGATGATTTGGATAGTAGAGCGAGTGGGACTAAGACTAACGGTGACAGTAGTGATAATGAAGCTGAGAGTAGTGTTAATGAGTGTGGGGATGGTGTGGTGAGGCAGGGAGGGAGTGAGAAGAGGGAAGGGATGAAGAGGAGTGCGGGTGGGGAGATTGCACCCACCACCAGGCACTATAGGAGTGTCTCCATGGATAGTTTCATTTCGAAGCTGAACTTTGGTGATGAGTCGCCGAAGTTGCCACCTTCTCCCGGTCCACGAACCGGTTTGATTCCGCCAGCCGGTGGAGTTGATGGGAATTCGTCGGCCTTCAGCTTGGAGTTTGGAAATGGGGAGTTCAGCGGGCCTGAATTGAAGAAAATTATGGCCAATGAAAAACTTGCTGAGATTGCCTTGACCGATCCAAAGCGTGCAAAAAGGATTTTGGCCAACAGGCAATCGGCTGCACGATCCAAAGAGCGGAAGATGCGGTACATTTCTGAGCTAGAACATAAGGTTCAGACCCTACAGACGGAAGCCACCACACTATCTGCACAGCTTACCCTGTTACAGAGAGATTCTGCTGGACTCACTAACCAGAACAGCGAGTTGAAGTTTCGCCTTCAGTCCATGGAACAACAAGCAAAGCTCCGAGATGCTCTAAATGAGGCGCTTACTGCTGAGGTTCAAAGACTAAAGCTTGCTACAGCTGAACTGAGTGGGGATTCGCATGGTTCTAGCTGTTTGATTCCTCAACATTCTGTCAATCCTATGATGTTCCAGCAGCAGCCTCCCACTGCATCCCAACAAAACATTAATCTCCAACAGCAACAGCAGCACCACCAGAATGGTAATGGCAATTCAAATTCCGACATAAAACAATAA 1677 0.5069 MGENEEATNDMMQRLHCSSSFLRQPLNMEQLSIPQFNPSQMRARHPHQHQFDGGNSNKRAGIPPSHPHQIPPISPYSQIPVTRQQQMGSLNISPTPTHTRSLSQPSFFSLDSLPPLSPSPFRDSSSTSVSEAADVSMEDRDVTSHSLLPPSPFARTLNTSNNSNLPLPPRKAHRRSNSDIPFGFSTVLQSSPPLIPLRGRENPVLAKPAQLVKRETPWDRGVDHSNVEGSGEKKSPEGEVVDDLFSAYMNLDSFDALNSSGTDDKNGTENRDDLDSRASGTKTNGDSSDNEAESSVNECGDGVVRQGGSEKREGMKRSAGGEIAPTTRHYRSVSMDSFISKLNFGDESPKLPPSPGPRTGLIPPAGGVDGNSSAFSLEFGNGEFSGPELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKLATAELSGDSHGSSCLIPQHSVNPMMFQQQPPTASQQNINLQQQQQHHQNGNGNSNSDIKQ 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02600 558 MobiDBLite consensus disorder prediction 280 295 - -
Spst2g02600 558 MobiDBLite consensus disorder prediction 149 167 - -
Spst2g02600 558 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 112 555 - -
Spst2g02600 558 Coils Coil 423 478 - -
Spst2g02600 558 MobiDBLite consensus disorder prediction 265 279 - -
Spst2g02600 558 MobiDBLite consensus disorder prediction 257 328 - -
Spst2g02600 558 Pfam bZIP transcription factor 407 465 IPR004827 GO:0003700|GO:0006355
Spst2g02600 558 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 405 468 IPR004827 GO:0003700|GO:0006355
Spst2g02600 558 MobiDBLite consensus disorder prediction 89 178 - -
Spst2g02600 558 MobiDBLite consensus disorder prediction 344 367 - -
Spst2g02600 558 FunFam probable transcription factor PosF21 406 459 - -
Spst2g02600 558 SMART brlzneu 403 467 IPR004827 GO:0003700|GO:0006355
Spst2g02600 558 MobiDBLite consensus disorder prediction 207 238 - -
Spst2g02600 558 MobiDBLite consensus disorder prediction 523 558 - -
Spst2g02600 558 SUPERFAMILY Leucine zipper domain 407 458 IPR046347 GO:0003700|GO:0006355
Spst2g02600 558 CDD bZIP_plant_RF2 408 459 IPR044759 GO:0003700|GO:0006355
Spst2g02600 558 Gene3D - 406 459 - -
Spst2g02600 558 MobiDBLite consensus disorder prediction 89 133 - -
Spst2g02600 558 MobiDBLite consensus disorder prediction 213 238 - -
Spst2g02600 558 MobiDBLite consensus disorder prediction 40 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02600 Spst-Chr2 25755402 25758554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02600 1 526 bZIP Transcription Factor Family AT4G38900 58.501 0.0 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst2g02600 bZIP_1 2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02600 - - gmx:780560 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02600 2 25755402 25758554 Spst2g02600 2 25755402 25758554 ECH