Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02597 ATGACAACTGGGCTGGGCCGCTTGAATTCGGTTCGGAGATCGGAACGTGAAACTTCTCTGTGCGGAAATCGAAATATCTCACTTCTAAGATCGGATCCATTCGACGTCGTTGCAGTGATAATGGCTTCGTTCAGCGGTGATGAGACGGCACCGTTTTTCGGCTTCCTCGGAGCCGCAGCTGCGCTCGTCTTCTCCTGTATGGGAGCTGCATATGGCACAGCAAAGAGTGGTGTGGGCGTGGCTTCGATGGGTGTGATGAGACCGGAGCTGGTGATGAAGTCTATTGTCCCGGTTGTTATGGCTGGAGTTTTGGGTATTTATGGTCTTATTATTGCTGTTATTATCAGTACTGGCATTAATCCCAAGGCCAAGTCTTATTACCTCTTCGATGGTTATGCACATCTCTCCTCTGGTCTTGCCTGTGGACTGGCTGGGCTCTCTGCTGGCATGGCTATTGGTATTGTTGGTGACGCTGGTGTTAGAGCCAATGCACAGCAACCAAAGCTTTTTGTTGGAATGATTCTCATCCTCATCTTTGCTGAAGCTCTTGCCCTGTATGGTCTCATTGTTGGTATTATCCTGTCTTCTCGTGCTGGTCAGTCTAGAGCTGATTAA 615 0.4911 MTTGLGRLNSVRRSERETSLCGNRNISLLRSDPFDVVAVIMASFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02597 204 FunFam V-type proton ATPase proteolipid subunit 50 201 - -
Spst2g02597 204 CDD ATP-synt_Vo_c_ATP6C_rpt1 52 119 - -
Spst2g02597 204 Gene3D - 50 201 IPR035921 -
Spst2g02597 204 PRINTS Vacuolar ATP synthase 16kDa subunit signature 173 196 IPR000245 GO:0033179|GO:0046961|GO:1902600
Spst2g02597 204 PRINTS Vacuolar ATP synthase 16kDa subunit signature 146 172 IPR000245 GO:0033179|GO:0046961|GO:1902600
Spst2g02597 204 PRINTS Vacuolar ATP synthase 16kDa subunit signature 69 93 IPR000245 GO:0033179|GO:0046961|GO:1902600
Spst2g02597 204 PRINTS Vacuolar ATP synthase 16kDa subunit signature 95 119 IPR000245 GO:0033179|GO:0046961|GO:1902600
Spst2g02597 204 SUPERFAMILY F1F0 ATP synthase subunit C 53 116 IPR035921 -
Spst2g02597 204 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 42 200 - -
Spst2g02597 204 CDD ATP-synt_Vo_c_ATP6C_rpt2 128 195 - -
Spst2g02597 204 Pfam ATP synthase subunit C 56 115 IPR002379 GO:0015078|GO:0033177|GO:1902600
Spst2g02597 204 Pfam ATP synthase subunit C 136 194 IPR002379 GO:0015078|GO:0033177|GO:1902600
Spst2g02597 204 NCBIfam V-type ATPase subunit C 52 160 IPR011555 GO:0033179|GO:0046961|GO:1902600
Spst2g02597 204 SUPERFAMILY F1F0 ATP synthase subunit C 126 195 IPR035921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02597 Spst-Chr2 25717514 25718969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02597 41 204 Primary Pumps ATPases(2) AT2G16510 98.171 3.08e-111 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02597 K02155 - gmx:100812380 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02597 2 25717514 25718969 Spst2g02597 2 25717514 25718969 ECH