Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02593 ATGCGAACCCTCTGCGACGTTTGCGAGAGCGCAGCTGCCATTCTCTTCTGCGCCGCCGATGAGGCTGCTCTCTGTTCTGCTTGCGACCACAAGATCCATACGTGTAATAAACTTGCTAGTAGACACATTCGGGTTGGCCTTGCTGACCCCACAGATGTTCCACGCTGTGACATATGTGAAAATGCACCTGCTTTCTTTTACTGTGAGATAGATGGTAGTTCGCTGTGTCTGCAATGTGACATGATTGTGCATGTTGGTGGGAAAAGAACTCATAAAAGATATCTTCTATTGAGGCAAAGAGTTGAGTTTCCAGGTGATAAATCTGCCCAAATGGAAGAACTAGGGCTGCAACCGCTGGATCAAAATGAATTCGGAAGGGATGAAAGTCAGTCACTCAAACCAAAATCAAGAGACAGTCAGCACAATCACAGTTTCTTACCTCTTCCAAGACAAGAAAATAATATTGATATTCATGGAAAAATGGATAAAAAGTTAATTGATCTCAACATCAGGCCATTGCGGTTAAATGGACCAACACCAAACAACCAGGAACAAGGTATGGATATTTTAAGAGGCAATAACCATGAATCTGCAAGTGTGCCGCCAGTAGAATCCTGCAAACAAGGGGCTGAGAAGTAA 639 0.4382 MRTLCDVCESAAAILFCAADEAALCSACDHKIHTCNKLASRHIRVGLADPTDVPRCDICENAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHKRYLLLRQRVEFPGDKSAQMEELGLQPLDQNEFGRDESQSLKPKSRDSQHNHSFLPLPRQENNIDIHGKMDKKLIDLNIRPLRLNGPTPNNQEQGMDILRGNNHESASVPPVESCKQGAEK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02593 212 MobiDBLite consensus disorder prediction 175 192 - -
Spst2g02593 212 MobiDBLite consensus disorder prediction 126 140 - -
Spst2g02593 212 MobiDBLite consensus disorder prediction 116 154 - -
Spst2g02593 212 Pfam B-box zinc finger 53 92 IPR000315 GO:0008270
Spst2g02593 212 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Spst2g02593 212 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Spst2g02593 212 SMART bboxneu5 51 96 IPR000315 GO:0008270
Spst2g02593 212 SMART bboxneu5 1 47 IPR000315 GO:0008270
Spst2g02593 212 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 144 - -
Spst2g02593 212 CDD Bbox1_BBX-like 56 96 - -
Spst2g02593 212 Gene3D Classic Zinc Finger 2 96 - -
Spst2g02593 212 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Spst2g02593 212 MobiDBLite consensus disorder prediction 174 212 - -
Spst2g02593 212 CDD Bbox1_BBX-like 4 47 - -
Spst2g02593 212 FunFam B-box zinc finger protein 19 2 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02593 Spst-Chr2 25665880 25667933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02593 1 196 C2C2-CO-like Transcription Factor Family AT2G21320 59.184 1.86e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Spst2g02593 zf-B_box 3.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02593 - - gmx:100527369 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02593 2 25665880 25667933 Spst2g02593 2 25665880 25667933 ECH
Spst9g00112 9 860343 861422 Spst2g02593 2 25665880 25667933 ECH
Spst2g02572 2 25437653 25438682 Spst2g02593 2 25665880 25667933 ECH