Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02564 ATGCTACTTCAGAGGCACGGGGTTGAATCCTATAGACCACTTGACAGCACAGACGAGAGCTTGCAAGTGGAGTCAAACCATGATTCCCATGGTCATGAGGAATTTGAGTTCAGTGAAGTCTTTGTACATCAACTTATACATACCATAGAATTTGTACTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTTTGGGCCCTTAGTCTTGCTCATTCAGAGTTATCAAGTGTATTCTACGAGAAGGTTCTGTTGATGGCATGGGGGTACAACAATGTGATTATCCTGATAGTGGGTCTCATTGTCTTCATTTTCGCTACCGTCGGAGTGTTACTTGTCATGGAAACTCTGAGTGCCTTCTTGCATGCGTTACGACTTCACTGGGTGGAGTTTCAGAACAAGTTTTACGAGGGCGATGGTTACAAGTTCCACCCTTTCTCGTTCCACTTGAGAGATGATGAGGAATGA 468 0.4444 MLLQRHGVESYRPLDSTDESLQVESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLMAWGYNNVIILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFHLRDDEE 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02564 155 PANTHER VACUOLAR PROTON ATPASES 8 150 IPR002490 GO:0033179|GO:0046961|GO:1902600
Spst2g02564 155 Pfam V-type ATPase 116kDa subunit family 16 148 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02564 Spst-Chr2 25367105 25368115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02564 5 155 Primary Pumps ATPases(2) AT4G39080 83.553 1.52e-83 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02564 K02154 - gmx:100810062 266.929