Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02558 ATGACAAAAGTGATGGAGTTGTTGAATGGTTGTGCAGAGTATGCATACACATTGAAAGTGGACGAGAAAAGCGACGTGTACAGCTTCGGGGTGGTGCTGTTGGAGCTGATAATAGGGAGGAAGCCAGTGGGGGAGTTTGGAGATGGGGTGGACATCGTTGGATGGGTGAACAAAACCAGATTGGAGCTCTCTCAGCCGTCAGATGCAGCCTTGGTGTTGGCAGTGGTGGACCCAAGGCTTAGTGAGTATCCACTGACAAGTGTCATTTACATGTTCAACATTGCTATGATGTGTGTGAAGGAAATGGGCCCTGCTAGGCCCACCATGAGAGAAGTAGTTCATATGCTCTCCAATCCTCCTCACTCCACCACCAACACTCACTCTCACAACCTCATTAATCTCTAG 405 0.4889 MTKVMELLNGCAEYAYTLKVDEKSDVYSFGVVLLELIIGRKPVGEFGDGVDIVGWVNKTRLELSQPSDAALVLAVVDPRLSEYPLTSVIYMFNIAMMCVKEMGPARPTMREVVHMLSNPPHSTTNTHSHNLINL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02558 134 Gene3D Transferase(Phosphotransferase) domain 1 9 132 - -
Spst2g02558 134 Pfam Protein tyrosine and serine/threonine kinase 14 116 IPR001245 GO:0004672|GO:0006468
Spst2g02558 134 SUPERFAMILY Protein kinase-like (PK-like) 13 117 IPR011009 -
Spst2g02558 134 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 13 117 - -
Spst2g02558 134 ProSiteProfiles Protein kinase domain profile. 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02558 Spst-Chr2 25331557 25331961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02558 13 125 Receptor kinase-like Gene Family AT1G75820 76.991 8.02e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst2g02558 PK_Tyr_Ser-Thr 1.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02558 - - gmx:732625 229.18