Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02557 ATGTATGCATGCATTTGGCAAAGGTATACGAGAGAGGGAGCAGTGGGAAGCAAGAGAGAGATGAGAAGGAGTGTGTGTTACAGGCTATTGATTCTTGTTTCCTTCATATGGTTCCGCGTGGCCACGTGTTCGTCGTTCAGTGACATGGATGCGCTGCTGAAGCTGAAGGACTCCATGAAGGGAAACAAAGCCAAGGATGACGCCCTCCATGACTGGAAGTTTTCCACCTCGCTTTCCGCTCACTGTTCATTTTCAGGCGTCAAATGCGACCAAGATCTTCGAGTAGTTGCAATCAACGTCTCCTTTGTTCCTCTCTTCGGACATCTTCCGCCGGAGATTGGACAATTTGACAAACTCCAAAACCTAACCATCGCCCAGGACAATCTCACCGGCCAGCTTCCCAAGGAGCTCACTGTCCTCACTTCCCTCAAGCTCCTCAACATCTCTCACAACTCCTTCTCTGGTAATTTTCCCGGGGAAATCATTCTTCCTCTGACGGAACTCGAGGTCCTCGACGCCTACGACAACAACTTCACCGGACCGCTTCCGGAAGAATTCGTCAAACTGGACAAACTCCGATACCTCAAGCTCGACGGGAATTACTTTTCCGGCAGCATACCGGAGAGTTACTCGGAGTTTAAGAGCTTGGCGTTTTTGAGCTTAAGCACTAACAGTTTATCGGGGAAGATTCCGAAGAGTTTGTCTCGGTTGAAGACGCTGACGTATCTCAAACTCGGTTACAACAACGCTTACGAAGGTGGAATCCCGCCGGAGTTCGGCTCCATGAAATCTCTAATATTCCTTGACCTCTCTAGCTGCAACCTCAGCGGCGAAATTCCCCCGAGCCTGAGCAATTTGAAGAACCTTGACACGTTGTTCTTGCAAATGAACAACCTCACTGGAACCATTCCGTCCGAACTCTCTGCCATGGAGAGCCTCATGTCACTGGATCTCTCCTTCAACGGTCTCACTGGAGAGATCCCGCAGAGTTTCTCTCAGCTCAGAAACCTCACTCTCATGAACTTCTTCCACAACAAGCTTTGCGGCTCTGTTCCTCATTTCGTCGGCGAGCTTCCGAATCTCGAAACGCTGCAGCTCTGGGAGAACAACTTCTCCTTCGTGCTGCCTGAGAACTTGGGCCAAAACGGGAGGTTAAAGTACTTCGACGTAACGAGCAATCACTTCACCGGGTTGATCCCTCCTGGTTTGTGCAAGAGTGAGAGCTTAAAAACCTTCGTCATCACCGATAACTTCTTCTACGGTCCAATCCCTGACAATATTGGAAACTGCAAGTCTCTCGTCAAGATCCGCGCCTCCAATAACTTCCTTAACGGCACCATTCCGTCGGGGATTTTCAAACTACCTTCCCTCACCATAATCGAGCTCTCGAACAACTGTTTTAACGGCGAACTGCCTTCCGAGATTTCCGGCGACTCTCTCGGGATTCTCACGCTTTCGAAGAACTTACTCACTGGGAGAATTCCCCCGGCGTTGAAGAACTTCAGGGCGCTGCAGACACTCTCACTGGACGCGAACGAGTTCGTTGGAGAAATCCCGGGGGAGGTTTTTGACTTACCAATGCTAACCACCGTCAACATAAGCGGCAACAATCTCACGGGACCAATCCCGACGACGTTGATTCACTGCGTTTCACTCTCCGCCGTTGACCTCAGCCGGAACATGCTCGTCGGGGAGATTCCCAAGGGCATAGAAAACCTCACGGACTTGAGCATTTTGAATGTTTCCAGAAACCTCATAACAGGACCAATCCCCGACGAGATTCGCTTCATGGCTAGCCTCACCACGCTGGATCTCTCCTACAACAATTTCAACGGCAAGGTCCCAACCGGGGGTCAGTTTTTGGTCTTCAACGAGAAGTCCTTTGCAGGGAACCCCAATCTCTGTTCCTCCCGCTCTTGCCCTAACTCCTCCATGTACCCCGACGACGCCTCCCAGAAGACGCCCAGCCCTTGGAGTTCGAAATCGACGAGGGTGATAATAATCGTGATTGCACTGGGCACAGCGGCGCTTCTGGTGGCGGTGACGGTGTACATGATGCGGAGGAGCAAGCTGCACAGGGCGATGACGTGGAAGCTAACGGCGTTCCAGCGCCTGGACTTGAAAGCGGAGGAGGTGGTAGAGTGTCTGAAGGAGGAGAACATAATAGGGAAAGGCGGTGCGGGGATCGTGTACCGCGGGTCCATGCCGAACGGAACCGACGTGGCGATAAAGCGGTTGGTCGGGGCGGGGAGTGGGAGGAACGATTACGGGTTCAGGGCGGAGATAGAGACCCTGGGGAAGATAAGACACAGAAACATAATGAGGCTTCTGGGTTACGTGTCGAACAAGGAGACGAATCTGCTTCTTTACGAGTACATGCCAAATGGGAGTTTAGGGGAGTGGCTGCATGGGGCGAAAGGAGGGCACTTGAAGTGGGAGATGAGGTTCAAGATTGCAGTGGAAGCTGCTAGGGGACTCTGTTATTTGCACCATGATTGTTCCCCTCTCATCATTCACAGGGACGTCAAATCCAACAATATATTGCTCGATGCTAACTTCGAAGCCCATGTCGCAGATTTTGGACTTGCCAAGTTCCTCTACGACCCAGGTGCCTCTCAGTCCATGTCCTCCATCGCCGGCTCCTACGGCTACATTGCTCCAGGTTCCATTAAACCTTCCTTTTCCTTCATTAACGAGCTTTCATAG 2706 0.5163 MYACIWQRYTREGAVGSKREMRRSVCYRLLILVSFIWFRVATCSSFSDMDALLKLKDSMKGNKAKDDALHDWKFSTSLSAHCSFSGVKCDQDLRVVAINVSFVPLFGHLPPEIGQFDKLQNLTIAQDNLTGQLPKELTVLTSLKLLNISHNSFSGNFPGEIILPLTELEVLDAYDNNFTGPLPEEFVKLDKLRYLKLDGNYFSGSIPESYSEFKSLAFLSLSTNSLSGKIPKSLSRLKTLTYLKLGYNNAYEGGIPPEFGSMKSLIFLDLSSCNLSGEIPPSLSNLKNLDTLFLQMNNLTGTIPSELSAMESLMSLDLSFNGLTGEIPQSFSQLRNLTLMNFFHNKLCGSVPHFVGELPNLETLQLWENNFSFVLPENLGQNGRLKYFDVTSNHFTGLIPPGLCKSESLKTFVITDNFFYGPIPDNIGNCKSLVKIRASNNFLNGTIPSGIFKLPSLTIIELSNNCFNGELPSEISGDSLGILTLSKNLLTGRIPPALKNFRALQTLSLDANEFVGEIPGEVFDLPMLTTVNISGNNLTGPIPTTLIHCVSLSAVDLSRNMLVGEIPKGIENLTDLSILNVSRNLITGPIPDEIRFMASLTTLDLSYNNFNGKVPTGGQFLVFNEKSFAGNPNLCSSRSCPNSSMYPDDASQKTPSPWSSKSTRVIIIVIALGTAALLVAVTVYMMRRSKLHRAMTWKLTAFQRLDLKAEEVVECLKEENIIGKGGAGIVYRGSMPNGTDVAIKRLVGAGSGRNDYGFRAEIETLGKIRHRNIMRLLGYVSNKETNLLLYEYMPNGSLGEWLHGAKGGHLKWEMRFKIAVEAARGLCYLHHDCSPLIIHRDVKSNNILLDANFEAHVADFGLAKFLYDPGASQSMSSIAGSYGYIAPGSIKPSFSFINELS 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02557 901 SUPERFAMILY Protein kinase-like (PK-like) 707 891 IPR011009 -
Spst2g02557 901 FunFam Leucine-rich repeat receptor-like protein kinase 45 208 - -
Spst2g02557 901 FunFam LRR receptor-like serine/threonine-protein kinase EFR 355 646 - -
Spst2g02557 901 SUPERFAMILY RNI-like 98 420 - -
Spst2g02557 901 Pfam Protein kinase domain 717 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02557 901 Gene3D Ribonuclease Inhibitor 207 250 IPR032675 -
Spst2g02557 901 Pfam Leucine Rich repeat 599 612 IPR001611 GO:0005515
Spst2g02557 901 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 252 887 - -
Spst2g02557 901 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 250 354 - -
Spst2g02557 901 FunFam Protein kinase superfamily protein 793 865 - -
Spst2g02557 901 Gene3D Ribonuclease Inhibitor 354 646 IPR032675 -
Spst2g02557 901 Gene3D Ribonuclease Inhibitor 45 206 IPR032675 -
Spst2g02557 901 Gene3D Transferase(Phosphotransferase) domain 1 793 894 - -
Spst2g02557 901 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
Spst2g02557 901 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 685 792 - -
Spst2g02557 901 SMART serkin_6 716 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02557 901 Pfam Leucine rich repeat N-terminal domain 47 90 IPR013210 -
Spst2g02557 901 Gene3D Phosphorylase Kinase; domain 1 680 792 - -
Spst2g02557 901 Gene3D Ribonuclease Inhibitor 251 353 IPR032675 -
Spst2g02557 901 ProSiteProfiles Protein kinase domain profile. 716 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02557 901 SUPERFAMILY L domain-like 399 637 - -
Spst2g02557 901 Pfam Leucine Rich Repeat 264 286 IPR001611 GO:0005515
Spst2g02557 901 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Spst2g02557 901 Pfam Leucine rich repeat 288 347 IPR001611 GO:0005515
Spst2g02557 901 SMART LRR_typ_2 597 620 IPR003591 -
Spst2g02557 901 SMART LRR_typ_2 358 382 IPR003591 -
Spst2g02557 901 SMART LRR_typ_2 501 525 IPR003591 -
Spst2g02557 901 SMART LRR_typ_2 454 478 IPR003591 -
Spst2g02557 901 SMART LRR_typ_2 262 286 IPR003591 -
Spst2g02557 901 SMART LRR_typ_2 310 334 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02557 Spst-Chr2 25328784 25331489 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02557 43 887 Receptor kinase-like Gene Family AT1G75820 60.731 0.0 1038
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst2g02557 Pkinase 4.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02557 - - gmx:732625 1470.68