Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02553 ATGGCTTCCTCAAGTGGAACATGCTCAGGGTCATCCTCTCTGCTTCAGAACTCAGGTTCTGAGGAGGACTTGCAAGCGGTGATGGATCAGAGAAAGAGGAAGAGGATGATATCAAATCGAGAATCTGCACGGCGATCTCGCATGAGGAAGCAGAAGCACTTGGACGATCTCGTTACGCAAGTAGCACAGCTGAGAAAGGAGAATCAGCAGATACTCACCAGCGTCAACATCACCACGCAACAGTTCTTGAGCGTTGATGCTGAGAACTCAGTGCTGAGGGCTCAAGTGGGAGAGCTCAGCCACAGGTTAGAGTCTCTCAACGAAATCATCGAGGTCCTGAATGCTGGTTTTGGCACCACCACCTTCATTGAACCAACCACCAATAACACCTTCTTCAACCCCTTGAACATGGGGTATCTGAATCACCCCATCATGGCTTCTGCAGACATATTGCAGTACTGA 462 0.4957 MASSSGTCSGSSSLLQNSGSEEDLQAVMDQRKRKRMISNRESARRSRMRKQKHLDDLVTQVAQLRKENQQILTSVNITTQQFLSVDAENSVLRAQVGELSHRLESLNEIIEVLNAGFGTTTFIEPTTNNTFFNPLNMGYLNHPIMASADILQY 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02553 153 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Spst2g02553 153 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Spst2g02553 153 MobiDBLite consensus disorder prediction 1 52 - -
Spst2g02553 153 Pfam bZIP transcription factor 31 73 IPR004827 GO:0003700|GO:0006355
Spst2g02553 153 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Spst2g02553 153 Coils Coil 47 74 - -
Spst2g02553 153 MobiDBLite consensus disorder prediction 1 24 - -
Spst2g02553 153 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Spst2g02553 153 Gene3D - 29 88 - -
Spst2g02553 153 FunFam Basic region/leucine zipper protein 29 111 - -
Spst2g02553 153 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Spst2g02553 153 MobiDBLite consensus disorder prediction 25 52 - -
Spst2g02553 153 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02553 Spst-Chr2 25243953 25244414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02553 25 153 bZIP Transcription Factor Family AT4G34590 55.396 6.72e-49 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst2g02553 bZIP_1 1.3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02553 K25786 - gmx:100101862 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02553 2 25243953 25244414 Spst2g02553 2 25243953 25244414 ECH