Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02547 ATGGCAATAGAACGTGTGCGCGATGTTGCAGAGAACTGTGAAGAGGCTTCTGCAGTTGGAAGCATGGATACAGAGGAAAAAGGGGAAGGTTTTCGGAGATTTGTGTTTCCGCCTCTGCCTGAGAGAGAGTGTAAACCTTCATCTACTTCTTCTGTTACTTTACTTTACCTCTCACAAATCATGGCTCCGAAGAAGGATAAGGCTCCTCCACCTTCCTCCAAGCCCGCCAAATCTGGCGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTGCTGTTTGATCAGGGTACCTATGACAAGCTCCTCACCGAAGCACCCAAATATAAGCTTATCACTCCGTCCATCCTCTCTGATCGATTGAGGATTAACGGATCGCTGGCAAGGAAGGCGATAAGAGAACTGATGGCTAGAGGTTCCATCAGGATGGTGTCTGCCCATGCAAGTCAGCAAATTTACACGAGGGCAACGAACACCTAA 507 0.4832 MAIERVRDVAENCEEASAVGSMDTEEKGEGFRRFVFPPLPERECKPSSTSSVTLLYLSQIMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKYKLITPSILSDRLRINGSLARKAIRELMARGSIRMVSAHASQQIYTRATNT 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02547 168 FunFam 40S ribosomal protein S25 81 168 - -
Spst2g02547 168 PANTHER 40S RIBOSOMAL PROTEIN S25 61 168 IPR004977 -
Spst2g02547 168 MobiDBLite consensus disorder prediction 61 96 - -
Spst2g02547 168 Pfam S25 ribosomal protein 68 165 IPR004977 -
Spst2g02547 168 Gene3D - 81 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02547 Spst-Chr2 25156145 25161375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02547 61 168 Cytoplasmic Ribosomal Protein Gene Family AT2G21580 89.815 2.20e-54 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02547 K02975 - gmx:100789867 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02547 2 25156145 25161375 Spst2g02547 2 25156145 25161375 ECH