Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02523 ATGGGAAAGGATGGGGAGTCCAACACACACCCCGTAACCCTGGTTAACAGTCCAGCAGCTATAAAACCATACTTTGGGGTTCCCACTTCCATCGTGCAAATCTTATCCCTTTTACGATGCTTCGTCGGTGGGCTTGCATGGGCCACCGACACAGATGCCCTGGAGAAGGCTTTCTCTGTATACGGCGAAATCGTTGAATCGAAGATAATCAACGATCGTGAGACCGGAAGATCCAGGGGTTTTGGATTTGTGACCTTCTCTTCGGAGCAGTCCATGATAGATGCGATCCAAGGGATGAACGGCCAGAGCCTTGATGGCCGTAACATCACTGTGAACAAAGCTCAGTCCCGTGGGGGAGCCGGAGGCGGAGGCGGAGGCGGCGGTCGTGGTGGAAGTGGTTATGGAGGAGGCGGAGGGTACAACCGCGGTGGTGGTGGATATGGTGGCGGTGGCGGTGGTGGATACGGTGGTCATCGTGACGGAGGAGGATTCAACCGTAACGGTGGAGGTTATGGAGGAGGTGGTGGTTATGGCGGTGGCAGAGACCGAGGTTATGGTGATGGTGGTTCTCGCTACTCTCGCGGTGGTGATGGAGGAGATGGTAGCTGGAACTAG 615 0.5561 MGKDGESNTHPVTLVNSPAAIKPYFGVPTSIVQILSLLRCFVGGLAWATDTDALEKAFSVYGEIVESKIINDRETGRSRGFGFVTFSSEQSMIDAIQGMNGQSLDGRNITVNKAQSRGGAGGGGGGGGRGGSGYGGGGGYNRGGGGYGGGGGGGYGGHRDGGGFNRNGGGYGGGGGYGGGRDRGYGDGGSRYSRGGDGGDGSWN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02523 204 Gene3D - 37 148 IPR012677 -
Spst2g02523 204 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 40 193 - -
Spst2g02523 204 SMART rrm1_1 39 112 IPR000504 GO:0003723
Spst2g02523 204 SUPERFAMILY RNA-binding domain, RBD 39 126 IPR035979 GO:0003676
Spst2g02523 204 CDD RRM2_NsCP33_like 39 114 - -
Spst2g02523 204 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 116 IPR000504 GO:0003723
Spst2g02523 204 MobiDBLite consensus disorder prediction 151 204 - -
Spst2g02523 204 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 109 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02523 Spst-Chr2 24819293 24820343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02523 41 117 Eukaryotic Initiation Factors Gene Family AT2G36660 37.662 8.96e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02523 - K13195 ccaj:109800369 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02523 2 24819293 24820343 Spst2g02523 2 24819293 24820343 ECH