Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02521 ATGCCCAGCGCGTGTTCTTCAGTAACCAGTGCCTCTAATGAAATAAGAGTGACAACTGTTAACTTATCCAGTGTGGATTGCACCTCCATCTTCACATTGAGTTTTTTCGTGCTCGATCGAGCAAATAGGAGGAAAAAAAAAAAAAAGATGTTTATTTCTTGTCAAAAATACAACCTCTACTTTCCCTGTTCCTCCGTTCCCCTGCACAATCCAACAACAACATGCACCATTTTCAATTGCCAAAACCAAAATGAGCATCAGTCCATTCTCCGCAAGCACAATTCCAAATCCACTGCGTATCTCCTTCACCATCTCTCCCTCAAGGATGGGGTACCCATTCCCGCTTCCATCCCCAAACCCAGCGAGCTTCTAGACCCAATGCCCCACGAAGAGAAGGTGAAGGTTTTGGAGCTTTCCCTCGTCAGGAAAAGGACCCCTCAGTTCCCCGGTTCCATCTACGCTCAATCTCCTAGCGACTCCGATGTGGGTTCTTCTCTGCCTCCACTCCGCACTCTCTTTCAATCGGGTGCTGACCCTGATTATAAAGACGAGAAGGGAGAGGAGGAGGAGGAGATGATAATGCGCGCTCTCGAGATTCGCAGGAAGGTCACCGAAGAGGTTTTTAAAGAAGCCATGCGAAAGGGGAAGTTTGGAATCACCTACACTACCAATTTGATTGGCAGGTTATCCGGTCTTATGGATTACATCATGATTGAAGCTGCTAACTTGAAAAGATTGCCCGAATTTTCAAACTCCACCTTCAATTTACGCGCCCAAACTGTCATTGACGACTCTAAAGTTGTGCCCCTTATTAGATGGTTGAAGCATAATTCACTATCGTATCCTCGGATAGCGAAGATCATTTTGATGTCAAGAGGAAAACCTGAGGCCATAAGGAGTTTTGTCACATGGTTGAAATCGGTACGTGTGAAAGGAGAGTTTCTCGGTGTTGTAATGTTGAATGCTGGAGAGAATATATTTCAGCGTAGACAAGAGGAGCTGGATGAGATTGTTATGTATTTGGAGTCCAATGGAGTAAGGAGGGATTGGATGGGTTATGTCATTAGTCGTTGTCCTCAGTTATTGTCTTACAGCTTAGAAGAAGTCAAAACTCGTGCACATTTCTACCTAGATATGGGTTTAAATGAGAAGGATTTTGGTACAATGGTTTTTGATTTTCCTAAAGTTCTTGGTTACTACTCTATGGAAGAAATGAATGAAAAGGTTAATTACTTGAAAGAATTTGGGCTTCAAATTAAGGATGTTGGCAGATTGCTTGCATTTAGGCCACAATTGATGGCGTGCAGCATTGATGAACAGTGGAAGCCTCTTGTTAAGTATCTGTATTATTATGGGATCACTAGAGATGGCATGAGGAGAATGCTTGTCATTAAACCAATGGTTTTTTGTGCTGACTTGCAGAAGACTATTGTGCCAAAGGTACAATTTTTTGAGAACCTGGGGGTTCGCAATGATGGGATTGGCAACATGCTGGTGAAGTTTCCTCCTCTACTCACTTACAGCCTGCAGAAGAAAATTAGACCAGTGGTCATATTCTTGATGACCAAAGCTGGAGTCAATGAGAAAGATATTGCCAAGGTTGTAGCTCTCGGACCTGAGCTCTTGGGATGCAATATACTACATAAGCTTGATGTAAATGTAAAATATTTTTTATCTCTTGGCATACGTCTTTGGCAATTGGGTGAGATGATTACTGATTTCCCAATGCTGCTCAGATACAGTCCAGATGTCCTTCGTCCCAAGTATATTTTTTTGCGAAAATCCATGGTCAGGCCTTTGAAAGATCTCATTGAGTTTCCAAGGTTTTTCAGCTATTCCCTTGAGGGTCGAATTATCCCAAGGCACAAGGTTCTAGTGGAGAACCATATTAATATTAAGCTGAGATACATGTTGGCTAGCACTGACGAAGAATTCAACAAAATGGTCTACAGTTTCATTAGAAAACGCAGCAGATTTGAATCTGCCGTCACAAATGAGAGCACTACCCATCCCTCCCATTCTGTTGTTAATGGAGATATTTCTACACCCTTGGAATAA 2058 0.4252 MPSACSSVTSASNEIRVTTVNLSSVDCTSIFTLSFFVLDRANRRKKKKKMFISCQKYNLYFPCSSVPLHNPTTTCTIFNCQNQNEHQSILRKHNSKSTAYLLHHLSLKDGVPIPASIPKPSELLDPMPHEEKVKVLELSLVRKRTPQFPGSIYAQSPSDSDVGSSLPPLRTLFQSGADPDYKDEKGEEEEEMIMRALEIRRKVTEEVFKEAMRKGKFGITYTTNLIGRLSGLMDYIMIEAANLKRLPEFSNSTFNLRAQTVIDDSKVVPLIRWLKHNSLSYPRIAKIILMSRGKPEAIRSFVTWLKSVRVKGEFLGVVMLNAGENIFQRRQEELDEIVMYLESNGVRRDWMGYVISRCPQLLSYSLEEVKTRAHFYLDMGLNEKDFGTMVFDFPKVLGYYSMEEMNEKVNYLKEFGLQIKDVGRLLAFRPQLMACSIDEQWKPLVKYLYYYGITRDGMRRMLVIKPMVFCADLQKTIVPKVQFFENLGVRNDGIGNMLVKFPPLLTYSLQKKIRPVVIFLMTKAGVNEKDIAKVVALGPELLGCNILHKLDVNVKYFLSLGIRLWQLGEMITDFPMLLRYSPDVLRPKYIFLRKSMVRPLKDLIEFPRFFSYSLEGRIIPRHKVLVENHINIKLRYMLASTDEEFNKMVYSFIRKRSRFESAVTNESTTHPSHSVVNGDISTPLE 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02521 685 Gene3D Transcription termination factor 3, mitochondrial 429 654 IPR038538 -
Spst2g02521 685 PANTHER CGI-12 PROTEIN-RELATED 334 418 IPR003690 GO:0003690|GO:0006355
Spst2g02521 685 Coils Coil 684 685 - -
Spst2g02521 685 SMART mt_12 352 382 IPR003690 GO:0003690|GO:0006355
Spst2g02521 685 SMART mt_12 459 490 IPR003690 GO:0003690|GO:0006355
Spst2g02521 685 SMART mt_12 387 418 IPR003690 GO:0003690|GO:0006355
Spst2g02521 685 SMART mt_12 600 631 IPR003690 GO:0003690|GO:0006355
Spst2g02521 685 SMART mt_12 532 563 IPR003690 GO:0003690|GO:0006355
Spst2g02521 685 SMART mt_12 495 527 IPR003690 GO:0003690|GO:0006355
Spst2g02521 685 SMART mt_12 423 454 IPR003690 GO:0003690|GO:0006355
Spst2g02521 685 SMART mt_12 568 599 IPR003690 GO:0003690|GO:0006355
Spst2g02521 685 MobiDBLite consensus disorder prediction 663 685 - -
Spst2g02521 685 Pfam mTERF 283 421 IPR003690 GO:0003690|GO:0006355
Spst2g02521 685 Pfam mTERF 420 645 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02521 Spst-Chr2 24796421 24800107 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Spst2g02521 mTERF 2e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02521 K15031 - qsa:O6P43_001902 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02521 2 24796421 24800107 Spst2g02521 2 24796421 24800107 ECH