Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02515 ATGACGGAGGCTAACTCAACCCCAAGTGTCAGCTTAAAGCTTCTCGTCTTGGTAGCTATTTTGGTCGTCTTCGCAGTGGTGATTGTGCTTCTGATCTTCTTCCTGTGCTTGCGGGGGAGCCGGAGTTGGAAGCGGCGGAAGCTGGCGGTGAAACACAGCTCCGGGAGCATCCCTCTGGTGTCTAAGGAGATCATGGTGGTGAAAACCTCGGATCTCACCCCTGCGACGACGAGCGAGATTGGTGACGTGGAGGGTGATCCGAAGAAGGAGGCGGATGTGAAGGTTGATATTGGAGCGGTGACAGCAGGGAAGAGCGAAGTGTCCGGTGGTGGGGCCCACCGCAGCGAGGTGTCGGTGGAGGATCCGAACATAGGGTGGGGCCGGTGGTACAGCATGAGCGAAGTGGAGCTTGCCACGCGCGGGTTCGCGGAAGGGAATGTTATTGGGGAAGGTGGGTACGGGGTTGTGTACAGAGGAATTTTGCAGGATGGTTCCGTCGTGGCTGTCAAGAATCTTCTCAACAACAAGGGCCAAGCTGAGAAGGAGTTTAAGGTAGAGGTTGAAGCTATTGGAAAAGTAAGACATAAGAATTTGGTTCGTCTGGTAGGATATTGCGCAGAAGGTGCTCGAAGGATGCTTGTTTATGAGTATGTTGACAATGGAAACCTGGAACAGTGGCTGCATGGTGATGTAGGACCAGTTAGCCCCTTGACATGGGACATTCGAATGAGAATTGCTACTGGAACTGCAAAAGGGCTAGCCTATTTGCATGAAGGCTTAGAACCCAAAGTTGTGCACCGGGATATAAAATCCAGTAACATTCTATTGGATAAAAACTGGAATGCCAAAGTATCAGATTTTGGACTTGCCAAACTCTTAGGATCTGAGAAAACCCATGTGACTACGCGTGTAATGGGAACATTCGGATATGTTGCACCTGAGTATGCAAGCTCTGGTATGCTTAATGAGCGCAGTGATGTGTATAGCTTCGGAGTTCTTCTCATGGAGATAATCACAGGAAGAAGCCCCATTGATTATTCAAGACCACCTGGAGAGATGAATTTAGTAGATTGGTTCAAGGCAATGGTGGCAAGTCGTCGCAGTGAGGAGCTAGTTGATCCTTTAATTGAGATTCCACCCTCTCCAAGATCTCTGAAACGAGTTTTACTGATTTGTCTGCGGTGTATAGACTTGGATGTCGTTAAACGACCAAAGATGGGTCAAATTGTTCATATGCTTGAGACAGATGATTTCCCCTTTCGTTCTGAGCTACGTACAGTTAGAGAGAAAGATCCTGTGTCTTCTCATGCAGATGTTTCCATTAAAGTTCCTTATCCACCACCAAAGCATGCAGAAACCGTAGAAAAATCAAGATGGAGATGA 1383 0.4823 MTEANSTPSVSLKLLVLVAILVVFAVVIVLLIFFLCLRGSRSWKRRKLAVKHSSGSIPLVSKEIMVVKTSDLTPATTSEIGDVEGDPKKEADVKVDIGAVTAGKSEVSGGGAHRSEVSVEDPNIGWGRWYSMSEVELATRGFAEGNVIGEGGYGVVYRGILQDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAEGARRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDIRMRIATGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVAPEYASSGMLNERSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLVDWFKAMVASRRSEELVDPLIEIPPSPRSLKRVLLICLRCIDLDVVKRPKMGQIVHMLETDDFPFRSELRTVREKDPVSSHADVSIKVPYPPPKHAETVEKSRWR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02515 460 SMART serkin_6 142 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02515 460 FunFam Probable serine/threonine-protein kinase At1g01540 122 217 - -
Spst2g02515 460 ProSitePatterns Protein kinases ATP-binding region signature. 148 170 IPR017441 GO:0005524
Spst2g02515 460 ProSiteProfiles Protein kinase domain profile. 142 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02515 460 Gene3D Phosphorylase Kinase; domain 1 113 217 - -
Spst2g02515 460 MobiDBLite consensus disorder prediction 431 460 - -
Spst2g02515 460 PANTHER OS01G0323000 PROTEIN 5 434 - -
Spst2g02515 460 FunFam Putative receptor-like serine/threonine-protein kinase 218 428 - -
Spst2g02515 460 SUPERFAMILY Protein kinase-like (PK-like) 120 415 IPR011009 -
Spst2g02515 460 Gene3D Transferase(Phosphotransferase) domain 1 218 425 - -
Spst2g02515 460 CDD STKc_IRAK 148 414 - -
Spst2g02515 460 Pfam Protein kinase domain 144 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02515 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02515 Spst-Chr2 24761024 24764576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02515 4 416 Trihelix Transcription Factor Family AT1G70460 42.105 9.24e-97 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Spst2g02515 Pkinase 5.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02515 - - gmx:100305442 769.615