LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst2g02498	ATGGAGGACAAAAACAAGACAGTTGCCAAGCCTGATGACAAAAGTACTTCCCCCAAGAATGAAACACCAAACCTTCCCAGACCCCTAACTCCTTGGTCTAGTTCTGGTCAGGCTTCCGCTTTTCATAATTTTGGGTCCACTCCAACTCCCAGTTTACCTCCAGCTAGTCCTCACTTTTACTCCTGCTGGTTCGGAAGCCAGATGTGGAATAGACCAATGCAATATGGATCTCTGTATCAAAGTAGGTCGTTCTCCAATTATCCTATGATGCCAACATGGATTGGTCAGAACTCTCTATTAGCTTCTGCGAATACAATGCAAAGGACTTCTGCTGAAAACAAAACGCATTTAGAGAACCAATCGAACAGAAGCTCTACAAGCAACTTAACTCCCAAAGCAAAAGAAAATGAAGGAAGTCCTTCAATCCAAGAAACCAACATGGGAGGATTAACAAGGAGTGTGACTAGTGATAGCAAGGAAACAACTGTTGTAGTCCATGATGATAAGAAAGATGGTGGATCAACAAAGGAAAGTAACAATGCAAAAGAACAAAGAAAAAGGAAGTCAGAGCAGACATCATCTGAGATCTCAAGCCTGAAGACCACAAAGGATATTCCTTCACCTAAGCAGCAGCAAACTAGGATGATGCCTAGAACTGATAATTTTGAAGCAAGCTCAACTGATCCGAATCAGAATTTGCATATAGACCCCAATGCATCTGCCGCTAATCCTCAACTTGAAAAGGTGGAAAGTGACCATACAAAAGAACAAGGAAAACTGAAGGCGATGGCTAAATCATCTAAGAGACCAAGGATCAAGATTATAAAGTCATGGATTGTCAATTCTGAGAAGCGGTTTCAGCTGAAGAATATCCCTTCAATTAATCAACAGCAATCCAGTGTGGCAGCGGGAAATGGTGGTGGTGCAAACAATGTGACTAGTATTGAAAATCGAAATTCTGTTCAAGAGAATACAAATATTGCGTCGGATCATTTTGAAGCAAATCCAACTAAGCTGAATCGGAAATTGAGTACAAAACTCAAAGCATCTGCCACTAATCCTCAACTTGTGAAGGAGGAAACTGATGAAGCAAAAGAGCAAAGAAGAAGGCAGTCAAAGAAGAAATCAGCTAAGAGATCAAGGATCAAGATGAAGATGGAACGTGAAAGGCTAAATGAATCCATTAAAAATCTAGATGTTGAAAATGCTGCGCTAAAGAAAGAGCTTCATGACCTTATTGATGACTGTGACAAGCTCATAAAAAATAACGATTCCTTACAGGATGAACTCAATGAGATGTTTGGTGAAGAAACAGTAATGGAAGTTTTGAATGCACTGTCTGCTGACTTGGATGCTGATGGTGATAAAAACTCAAATGACAGTTGA	1386	0.4033	MEDKNKTVAKPDDKSTSPKNETPNLPRPLTPWSSSGQASAFHNFGSTPTPSLPPASPHFYSCWFGSQMWNRPMQYGSLYQSRSFSNYPMMPTWIGQNSLLASANTMQRTSAENKTHLENQSNRSSTSNLTPKAKENEGSPSIQETNMGGLTRSVTSDSKETTVVVHDDKKDGGSTKESNNAKEQRKRKSEQTSSEISSLKTTKDIPSPKQQQTRMMPRTDNFEASSTDPNQNLHIDPNASAANPQLEKVESDHTKEQGKLKAMAKSSKRPRIKIIKSWIVNSEKRFQLKNIPSINQQQSSVAAGNGGGANNVTSIENRNSVQENTNIASDHFEANPTKLNRKLSTKLKASATNPQLVKEETDEAKEQRRRQSKKKSAKRSRIKMKMERERLNESIKNLDVENAALKKELHDLIDDCDKLIKNNDSLQDELNEMFGEETVMEVLNALSADLDADGDKNSNDS	461

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst2g02498	461	MobiDBLite	consensus disorder prediction	1	49	-	-
	Spst2g02498	461	MobiDBLite	consensus disorder prediction	1	17	-	-
	Spst2g02498	461	MobiDBLite	consensus disorder prediction	194	247	-	-
	Spst2g02498	461	Pfam	bZIP transcription factor	363	423	IPR004827	GO:0003700\|GO:0006355
	Spst2g02498	461	PANTHER	G-BOX-BINDING FACTOR 3-RELATED	287	439	IPR044827	GO:0003700\|GO:0006355\|GO:0043565
	Spst2g02498	461	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	363	419	IPR004827	GO:0003700\|GO:0006355
	Spst2g02498	461	CDD	bZIP_plant_GBF1	367	417	IPR045314	GO:0003700\|GO:0006355
	Spst2g02498	461	MobiDBLite	consensus disorder prediction	18	49	-	-
	Spst2g02498	461	MobiDBLite	consensus disorder prediction	104	160	-	-
	Spst2g02498	461	MobiDBLite	consensus disorder prediction	104	259	-	-
	Spst2g02498	461	MobiDBLite	consensus disorder prediction	346	382	-	-
	Spst2g02498	461	Coils	Coil	381	436	-	-
	Spst2g02498	461	MobiDBLite	consensus disorder prediction	161	193	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst2g02498	357	454	bZIP Transcription Factor Family	AT4G36730	39.796	1.34e-15	75.9

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Spst2g02498		bZIP_1	3.9e-08	CL0018

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst2g02498	-		K20478	var:108339461	484.182