Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02431 ATGGATAGAGACAAAGACAGTAAATCCCCTCCTTTGCCACCTTCATCTTCCTCATCCCAACCTTTCAGTCACGACATAATCGGAATGCCCGATAATCCACCCAAAAACAGGGGTCATAGACGCGCTCATTCCGAGATTATCACCCTTCCCGATGACCTCACTTTCGACACCGATCTCGCCCTCGATGAAGACTTCCTCTCCCTAGTAGATCATCTCAATTCCCCTCCCTCTCAAGATAACAACAACCTCATCAACAATAACAATGACAGTAACAACGTTGGTAATGAAAGGCCGAGGGTTAGACACCAACATAGTCAGTCCATGGATGGGTCCATCCAGCCGGAGATGCTGGTCTTCGGCACCGATGACGTCTCCGGCGTGGATGCCAAAAAGGCTATGTCCGCTGACAAACTTGCTGAGCTTGCCTTAATTGATCCCAAACGGGCTAAAAGGATATGGGCAAACAGACAGTCTGCTGCAAGATCAAAAGAAAGGAAGATGCGTTACATTTCCGAGCTTGAAAGAAAGGTGCAGACATTACAAACAGAAGCAACATCCTTGTCTGCACAATTAAATCTCTTGCAGAGAGATACAAACGGACTGAATGCTGAGAACAGTGAGTTGAAGTTGCGGTTGCAAACCATGGAGCAACAGGTCCACTTACAAGATGCCTGTGTAGCAGTTGGCAGCATTAAATGA 699 0.4707 MDRDKDSKSPPLPPSSSSSQPFSHDIIGMPDNPPKNRGHRRAHSEIITLPDDLTFDTDLALDEDFLSLVDHLNSPPSQDNNNLINNNNDSNNVGNERPRVRHQHSQSMDGSIQPEMLVFGTDDVSGVDAKKAMSADKLAELALIDPKRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEATSLSAQLNLLQRDTNGLNAENSELKLRLQTMEQQVHLQDACVAVGSIK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02431 232 Coils Coil 163 218 - -
Spst2g02431 232 MobiDBLite consensus disorder prediction 72 110 - -
Spst2g02431 232 SUPERFAMILY Leucine zipper domain 147 198 IPR046347 GO:0003700|GO:0006355
Spst2g02431 232 MobiDBLite consensus disorder prediction 1 41 - -
Spst2g02431 232 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 145 208 IPR004827 GO:0003700|GO:0006355
Spst2g02431 232 SMART brlzneu 143 207 IPR004827 GO:0003700|GO:0006355
Spst2g02431 232 Pfam bZIP transcription factor 147 204 IPR004827 GO:0003700|GO:0006355
Spst2g02431 232 CDD bZIP_plant_RF2 148 197 IPR044759 GO:0003700|GO:0006355
Spst2g02431 232 FunFam probable transcription factor PosF21 146 199 - -
Spst2g02431 232 Gene3D - 146 200 - -
Spst2g02431 232 MobiDBLite consensus disorder prediction 72 94 - -
Spst2g02431 232 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 8 224 - -
Spst2g02431 232 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02431 Spst-Chr2 23962048 23965161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02431 6 225 bZIP Transcription Factor Family AT1G06070 64.961 1.14e-100 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst2g02431 bZIP_1 3.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02431 - - vun:114169967 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00334 5 2778420 2789287 Spst2g02431 2 23962048 23965161 PCT