Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02418 ATGGGGCTCTCATTAAAACGTCAATTATTGAATGTGAATCCATGTACAGTTAGGCTTCTATTTGAGCTGGTGGTTTTGTCATGCTTGTGGATGCAAGTTACAGGCCTTGGTTCCATGTCATCCATTGCCATCTCATATGGCGAAAAGGGTTCTGTGTTTTGTGGTTTGAAATCTGATGGCTCTCACACAGTGACATGTTATGGATCCAACTCGGCCATAATCTATGGAACACCTGCCCATTTCTCATTTCTTGGTCTAACAGCTGGAGATGGCTTTGTTTGTGGGCTTCTAATGGGTTCCAATCAACCATACTGCTGGGGTAGCAGTACCTACATTGAAATGGGAGTGCCTCAACCTATGATCAAAGGAGCACAGTACATAGAAATCAGTGCTGGTGATTATCATGTTTGTGGCTTGAGGAAACCTTTGACTGGAAGACACAGGTACATTTCCTTGGTTGATTGCTGGGGCTACAACATGACCAGGAACTATGTGTTTGGGGGACAGATTGAATCAATCACAGCTGGTTCTGAATTCAATTGTGGTCTTTTTTCTCAGAACAGGACTGTGTTCTGCTGGGGTGATGAGACTAATAGCCTAGTAATTAGTTTGATTCCACAAGACATGAGATTCCAGAAAATTTCAGCTGGTGGGTATCATGTGTGTGGAATCTCAGAAGGAGTGAATTCCAAGACTGTTTGTTGGGGGAGAAGCTTGAACCTTGGGGAAGAAATTTCAGTGGCACACACAGGTCAAGGAAACGTCGATTTGGCTCCAAATGATCCCATGCTTTCTGTAGTGGGAGGGAAGTTCCATGCGTGTGGCATTAAGAGCTATGATCGTGGTGTTATTTGTTGGGGCTTTGTTATCAAACGAAGCACTCCATCTCCTAGAGGGATTAAGGTTTTTGAAGTTGCAGCTGGTGATTATTTTACTTGTGCAGTGCTTGCTGAGAAATCTCTTATGCCTTCATGTTGGGGTGTTGATTTTCCCACCTCACTTCCTTTAGCTGTTTCACCGGGAATGTGTCAACCTGCTCCATGCCCTCCTGGTTCCTATGCTATTGGTCAGCAGCATAAGGGTCTTTGCAAATCACCAGATTCTCGTGTTTGCATGCGATGCAGTGGTGCATGTCCTCCTGAAATGTATCAGAAGAGTCCATGCAATTGGGCTTCTGATAGAATGTGTGAATATAACTGTGCCTCTTGCTCTTCATCGGAATGCTTCTTGAACTGCTCCTCTTCACATTCCAATGCTTTCACTGAGAAGAAAACTGAAAAATTTTGGGCTTTGCAGCTGCCAGTTGTCATTGCTGAGATTGCTTTTGCAGTTTTCATTGTTAGTGTAGTGACAATAACTGCAGTTTTATACGTCCGCTACAGGCTAAGAGATTGTGAGTGTTCAAAAGGTTCAAAGGTGAAGAAACTCATTGGGAATTCTTCCCTGCAAAACGAGAATAAGGTCAGGCCAGACTTGGAGGAGTTTAAGATCAGAAGGGCTCAAATGTTCACGTATGAGGAACTTGAAAGTGCAACTTGTGGATTCAATGAAGAGTCCGTAGTGGGGAAGGGAAGTTTCTCGTGTGTGTTCAAGGGAGTGTTGAAAGATGGGACAGTAGTTGCTGTGAAAAGGGCCATAGTGTCTCCCAACATGCAGAAGAATTCCAAGGAGTTTCACACTGAACTTGACTTGCTCTCAAGGTTAAACCACGCTCATTTGCTCAACCTTCTAGGCTATTGTGAAGAAGGTGGAGAGAGACTTCTTGTGTACGAGTTCATGGCTCATGGCTCTTTGCACCAACACTTGCATGGAACAAACCAAGTGTTGAGAGAACAGTTAAATTGGATAAGAAGGGTCACTATTGCAGTGCAAGCAGCACGGGGAATTGAATATTTGCATGGCTACGCTTGCCCTCCCGTGATTCACAGAGATATCAAGTCCTCAAACATTCTCATCGATGAAGAACACAATGCGAGAGTGGCGGATTTTGGTTTATCATTGTTGGGTCCTGCAGATAGTGGTTCACCACTGGCTGAACTCCCAGCTGGGACTCTTGGATATCTTGATCCTGAATACTATAGGCTTCATTACCTCACAACAAAATCAGATGTCTATAGTTTCGGTGTTCTTCTTTTGGAAATTCTAAGTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGGAACATAGTGGAATGGGCAGTGCCTCTTATAAAGTCAGGAGATATAATTGCAATTTTGGACCCGGTTTTGAAACCCCCTCCTGATCTTGAAGCCTTGAAGAGAATAGCCAACGTGGCTTGTAAGTGTGTGAGGATGAGAGGGAAAGAGAGACCCTCAATGGATAAAGTAACAACAGCATTGGAGAGAGGTCTTGCACAGTTAATGGGTAGTCCATGCATTGAGCAGCCTATTTTGCCCACTGAGGTGGTTTTAGGAAGCAACAGATTGCACAAGAAATCATCTCAAAGATCCTCCAACAGGTCAATTTCTGAGGCTGATGTGGTAGAAACTGAGGACCATAGGTTTGAGTTCAGGGCACCCTCATGGATAACTTTCCCCAGTGTAACATCTTCTCAAAGGAGAAAGTCATCAGTGTCTGAGGCAGATGTTGATGGGAAGAATAATGTAGAAGGCAAGAACTTGGGAAATGTTGGAGGGGGAGGTGATGTTTTGAGAAGCCTTGAGGAAGAGATTGGTCCTGCTTCTCCTGGAGAGAGGCTGTTCTTGCAGCACAACTTCTAA 2745 0.4419 MGLSLKRQLLNVNPCTVRLLFELVVLSCLWMQVTGLGSMSSIAISYGEKGSVFCGLKSDGSHTVTCYGSNSAIIYGTPAHFSFLGLTAGDGFVCGLLMGSNQPYCWGSSTYIEMGVPQPMIKGAQYIEISAGDYHVCGLRKPLTGRHRYISLVDCWGYNMTRNYVFGGQIESITAGSEFNCGLFSQNRTVFCWGDETNSLVISLIPQDMRFQKISAGGYHVCGISEGVNSKTVCWGRSLNLGEEISVAHTGQGNVDLAPNDPMLSVVGGKFHACGIKSYDRGVICWGFVIKRSTPSPRGIKVFEVAAGDYFTCAVLAEKSLMPSCWGVDFPTSLPLAVSPGMCQPAPCPPGSYAIGQQHKGLCKSPDSRVCMRCSGACPPEMYQKSPCNWASDRMCEYNCASCSSSECFLNCSSSHSNAFTEKKTEKFWALQLPVVIAEIAFAVFIVSVVTITAVLYVRYRLRDCECSKGSKVKKLIGNSSLQNENKVRPDLEEFKIRRAQMFTYEELESATCGFNEESVVGKGSFSCVFKGVLKDGTVVAVKRAIVSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGTNQVLREQLNWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDIIAILDPVLKPPPDLEALKRIANVACKCVRMRGKERPSMDKVTTALERGLAQLMGSPCIEQPILPTEVVLGSNRLHKKSSQRSSNRSISEADVVETEDHRFEFRAPSWITFPSVTSSQRRKSSVSEADVDGKNNVEGKNLGNVGGGGDVLRSLEEEIGPASPGERLFLQHNF 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02418 914 Pfam Protein tyrosine and serine/threonine kinase 518 787 IPR001245 GO:0004672|GO:0006468
Spst2g02418 914 ProSiteProfiles Protein kinase domain profile. 515 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02418 914 FunFam serine/threonine-protein kinase-like protein CCR1 485 592 - -
Spst2g02418 914 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 347 396 IPR001368 GO:0005515
Spst2g02418 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Spst2g02418 914 FunFam Serine/threonine-protein kinase-like protein CR4 35 202 - -
Spst2g02418 914 SUPERFAMILY RCC1/BLIP-II 37 288 IPR009091 -
Spst2g02418 914 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 20 914 - -
Spst2g02418 914 MobiDBLite consensus disorder prediction 856 889 - -
Spst2g02418 914 Gene3D - 78 339 IPR009091 -
Spst2g02418 914 Gene3D Transferase(Phosphotransferase) domain 1 593 796 - -
Spst2g02418 914 SUPERFAMILY Protein kinase-like (PK-like) 495 788 IPR011009 -
Spst2g02418 914 SMART serkin_6 515 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02418 914 SUPERFAMILY RCC1/BLIP-II 254 341 IPR009091 -
Spst2g02418 914 FunFam Receptor protein kinase CRINKLY4 593 795 - -
Spst2g02418 914 Gene3D Phosphorylase Kinase; domain 1 485 592 - -
Spst2g02418 914 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02418 Spst-Chr2 23880528 23883272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02418 19 914 Receptor kinase-like Gene Family AT3G59420 68.293 0.0 1249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Spst2g02418 PK_Tyr_Ser-Thr 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02418 - - gmx:100797455 1685.23