Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02417 ATGGGGCACAGTTCGAAGAAGAAGAAGCGCGGAGGCGGGAGCGGTCGCCGGAGCAAGGGAAGAACGCAGTCCAAAGATCATGCTTCTCAATTCGGCGCCGACGATTACGACCAGCTCTCCGATGAGATTACCGCATTGTGTGCAATTTTCCAAGAAGACTGCAAAGTTCTTCCAGGATCGCCTCGTCGTATAGTTATTAAGCTCAGGCCTTACTCAATGGACATGGGCTATGAGGACCTAGATGTTTCTGCCACTCTAGATGTCAGGTGCTTGCCTGGGTATCCTTTCAAGTGCCCCAAGCTGCAGATTACACCGGAGAAAGGGTTATCAGAAGCTGACGCTAATAAGCTTTTGTCTCTCCTCCATGATCAGTTCATTGATGTAGGGGATTTGCTACTTCTAACACGCAGAGAGGCTGGGAAACCTTGTCATATTATTGATCCCACCTCCTCCTTGGCTACTTTAAATGCTAGGGAGGGACGAGTAATGATCTATAATTTGGTTGAGGCTGCTCAAGAATTTCTCTCTGGTATTGAGCTAATTGCCATATCAAATGATTCTAAGCTTTTACACTCGACTGTGGAAAGCAATGAAGAATTGTTTACCAAGGATATGACATCTTTAAGTAAGAAGGGTTCTTTTGTATATGGTTTTGTAGACCTTTTCAGTGGCTATGGAGAAACATGGGGTTGGGGTTTTGGAATGGACGAAACTGCTGGAAAAAGTTCATCTCTTCCTTTGTCCAAGTTAGATGCCTCAAAACCATGTTTTGAGGCTTGTGAGAAGAAGTCTAATACTAAAGAAACACAGTTAATGGTGCAAGAACTTCGTTCCAAACTAGATACTGTCGGAGAAGTTAGTGAAGACAACAAAAATAATTTATCTTTGACTAATTCAAGCAGATCTACAGTGGAGGATTTTGTAGGGAATGACAATGAAGGTGAGAAAGAGTATTTTTTAGTTGACGAGTCTTCTGAAGAAATTGAGTCTTCTGAGTCTCTGCCTTCGGAGTCCTTGCCTCATCTTCAACCATCTCAAACAGTGGAAAAGGATTTAATAATGGTTCACATGCTTCGCCTTCTTTGTGCTTCTAAGGGATCATTGGCTGATTGTTTGCCACAAGTGGTAACAGAGCTGTACAATTTAGGGATAATTTCTGATTCAGCACGCAGTATGGCATCCGAACCACCTTCCATTTTCAGCAAAACCTTTGATCACATTTTCCAGAAACACCTGGCCTCATCTGGAATACCTCAATTTTGGAAGCCTGATGTTGGAGGCTCAAACACAGTTACCCACAGTTCTCGATATTTGAATGATTTTGAGGAGCTGCGCCCTCTAGGTCATGGTGGTTTTGGTCATGTCGTATTGTGCAAAAATAAACTTGATGGAAGGCAGTATGCAGTAAAGAAAATTCGTCTTAAGGACAAAAGCATGCCTGACCGAATATTAAGGGAGGTAGCTACACTTTCTCGTTTACAGCATCAGCATGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGAAGTTTCTGATTCTTATGGTGATTCTGCTTGGGGTTCAAAGACTACAGTAAGCTCTACTTTCAGCTTTAAAGCTGCAACGTCCAATGATGTCTTTGGGCATGATAATCAGCTTGAATCAACTTACCTTTATATACAAATGGAGTACTGTCCCAGGACTCTTCACCAGGTGTTTGAGTCATATAATAATCATTTCGACAAAGACCTGGCTTGGCATTTGTTTCGTCAAATAGTGGAAGGCTTGGCGCACATACACGGACAAGGAATAATTCATCGGGACTTAACACCAAATAACATATTCTTTGATGCCCGCAATGATATTAAAATTGGTGATTTTGGTCTTGCCAAGTTCTTGAAGTTAGAGCATCTGGACCAAGACCTGGGCCACACTGCTGATGCAACTGGAGTTTCCATTGATGGCACTGGACAAGTGGGGACATATTTCTATACAGCTCCTGAAATTGAGCAAGGATGGCCCAAGATTGATGAAAAGGCTGATATGTACAGCTTAGGAGTGGTCTTCTTTGAGCTTTGGCACCCATTTGGAACAGCAATGGAGAGACATGTTGTTTTATCTGATTTGAAACAGAAAGGGGAAGTTCCACCAACTTGGGTTGCTGAGTTTCCAGAACAGGAATCCTTACTGCAGCAGTTAATGTCTCCGGCTCCTTCAGATCGCCCTTCTGCCATAGAACTTCTGCAAAATGCATTTCCTCAGCGAATGGAGTCTGCATTATTGGATGGCAAAACAATGCAGAAATCAGAGGATACAAGCATATATGATAAAGTTTTAAATGCTATCTTTGATGAAGAGATGTTAAGCACAAAGCACATTCGTCAGGATGGTAGATTGGGATCAGTTGGAGATATCAGTTCATCCATTCAGTATGCAGCATTCAAAACTGAGGTTAGGGATTATGTTGTAGATGTGACCAGGGAAATTTTTAGACAGCATTGTGCAAAGCACCTAGAAATATCAACAATGAGATTATTGGATGATTTTAAACTTCTGACCCATGGAGGAGACATGCTTGAACTTTGCCACGAGTTGCGTTTTCCTTTTGTGAACTGGATTATATCTAACCAGCACATGCTTGGTGTTGAGTTTGGTGTTTTCATGAACCAAGGGTTTGATGATATCACGCCACAAGTCCTTTGTTTCCAATTACTCTGGTATATTGGCAAGATGATGCTGACTAGTCCTTCAGGGAATGGATGCTTAACAATGCAAGACATGAGGATTGAATGGGAAACACGATTTTACATGATGTGTAGAAATCTTCATTCAAACGATATGAGATATCATGTGTCTTTAGAAGAGCAGTTGGACATTCATCACCAAATCGCTACCTTCAGGAATCTGATTGGGGTTTCTACGATGGGAGATTTTGACATTATTGGTGGCACCTCGGCTTTGGCCGAAGCAGAGGTCATAAAGGTCACTAGGGACGTAGTCACTTGTTTTTTTCATGCAGATTCATGTGACATTCATCTCAACCATGGTGACCTTCTGGATGCAATTTGGTCATGGATTGGAGTCAAGGTAGAACTCAGACTCAAAGTAGCAGAGCTTCTTTCAATGATGGGTTCTTTGCGCCCACAATCCTCAGAAAGGAAATCAAAATGGGTCGTGATAAGGCGGCAACTTTTGCAGGAACTGAATTTAGCAGAGGCCATGGTAAATAGGTTACAGACTGTAGGTTTAAGATTTTGTGGATCTGCAGATCATGCACTCCCCCGATTAAGAGGAGCTCTTCCATCTGTGCTTGATGGTTCCGTTGGAAATGCATATCAAGCATTAAAAAGGCTAGAAAATGTATGTGTTGGTAATTCTAATGAAGTTGAGCTTGTCTTGAAAGGAAATCCTCCCACTGGTGTGGGGACTAGCCTTGCAGTGGAGACAATAATTCAGAATTGTCCTGTAGATATCAAGCCCAATAGAGCCGATGCCAGCACCAATATTCTTGTCTGCTCTAGAGGTGGAGGTGGTCTCCTGGTGGAGCGCATGGAGCTAGTTGCTGAATTATGGGAGGAGAACTTTAAGGCTGAATTTGTTCCTACCCCTGATCCAAGTCTTACAGAGCAGTATGAGTATGCTAATGAACATGGTATCAAATGCCTTGTCATTATCGCAGATACAGATTTCTCCTTGAGTGATTCTGTTAAGGTTCACCATCCATTTTATATGGGACAATCCTTGGATGGTCTCTTCTGTCCACAGGGAGATATTATTTTAAAGGGGTTGTTTCATGGCCTACATGTTCGACACCTTGAACATAAGAGGGAGAAAACTGTTGAGAGAAAAAACCTAGTCAAGTTTCTATCGGATGTCATGGCAACACAATTTAGAAATCCCGCCATTTGGATTTGA 3894 0.4227 MGHSSKKKKRGGGSGRRSKGRTQSKDHASQFGADDYDQLSDEITALCAIFQEDCKVLPGSPRRIVIKLRPYSMDMGYEDLDVSATLDVRCLPGYPFKCPKLQITPEKGLSEADANKLLSLLHDQFIDVGDLLLLTRREAGKPCHIIDPTSSLATLNAREGRVMIYNLVEAAQEFLSGIELIAISNDSKLLHSTVESNEELFTKDMTSLSKKGSFVYGFVDLFSGYGETWGWGFGMDETAGKSSSLPLSKLDASKPCFEACEKKSNTKETQLMVQELRSKLDTVGEVSEDNKNNLSLTNSSRSTVEDFVGNDNEGEKEYFLVDESSEEIESSESLPSESLPHLQPSQTVEKDLIMVHMLRLLCASKGSLADCLPQVVTELYNLGIISDSARSMASEPPSIFSKTFDHIFQKHLASSGIPQFWKPDVGGSNTVTHSSRYLNDFEELRPLGHGGFGHVVLCKNKLDGRQYAVKKIRLKDKSMPDRILREVATLSRLQHQHVVRYYQAWFETEVSDSYGDSAWGSKTTVSSTFSFKAATSNDVFGHDNQLESTYLYIQMEYCPRTLHQVFESYNNHFDKDLAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEHLDQDLGHTADATGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSDLKQKGEVPPTWVAEFPEQESLLQQLMSPAPSDRPSAIELLQNAFPQRMESALLDGKTMQKSEDTSIYDKVLNAIFDEEMLSTKHIRQDGRLGSVGDISSSIQYAAFKTEVRDYVVDVTREIFRQHCAKHLEISTMRLLDDFKLLTHGGDMLELCHELRFPFVNWIISNQHMLGVEFGVFMNQGFDDITPQVLCFQLLWYIGKMMLTSPSGNGCLTMQDMRIEWETRFYMMCRNLHSNDMRYHVSLEEQLDIHHQIATFRNLIGVSTMGDFDIIGGTSALAEAEVIKVTRDVVTCFFHADSCDIHLNHGDLLDAIWSWIGVKVELRLKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELNLAEAMVNRLQTVGLRFCGSADHALPRLRGALPSVLDGSVGNAYQALKRLENVCVGNSNEVELVLKGNPPTGVGTSLAVETIIQNCPVDIKPNRADASTNILVCSRGGGGLLVERMELVAELWEENFKAEFVPTPDPSLTEQYEYANEHGIKCLVIIADTDFSLSDSVKVHHPFYMGQSLDGLFCPQGDIILKGLFHGLHVRHLEHKREKTVERKNLVKFLSDVMATQFRNPAIWI 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02417 1297 ProSitePatterns Tyrosine protein kinases specific active-site signature. 597 609 IPR008266 GO:0004672|GO:0006468
Spst2g02417 1297 Coils Coil 1054 1074 - -
Spst2g02417 1297 FunFam eIF-2-alpha kinase GCN2 429 557 - -
Spst2g02417 1297 SUPERFAMILY Class II aaRS and biotin synthetases 967 1144 IPR045864 -
Spst2g02417 1297 MobiDBLite consensus disorder prediction 289 308 - -
Spst2g02417 1297 FunFam eIF-2-alpha kinase GCN2 30 128 - -
Spst2g02417 1297 ProSiteProfiles RWD domain profile. 41 178 IPR006575 GO:0005515
Spst2g02417 1297 FunFam eIF-2-alpha kinase GCN2 561 755 - -
Spst2g02417 1297 ProSiteProfiles Protein kinase domain profile. 441 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02417 1297 ProSitePatterns Protein kinases ATP-binding region signature. 447 471 IPR017441 GO:0005524
Spst2g02417 1297 Gene3D Ubiquitin Conjugating Enzyme 29 127 IPR016135 -
Spst2g02417 1297 MobiDBLite consensus disorder prediction 1 31 - -
Spst2g02417 1297 MobiDBLite consensus disorder prediction 1 16 - -
Spst2g02417 1297 Gene3D Phosphorylase Kinase; domain 1 428 557 - -
Spst2g02417 1297 MobiDBLite consensus disorder prediction 289 307 - -
Spst2g02417 1297 Pfam RWD domain 38 126 IPR006575 GO:0005515
Spst2g02417 1297 SUPERFAMILY Protein kinase-like (PK-like) 437 747 IPR011009 -
Spst2g02417 1297 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 70 788 - -
Spst2g02417 1297 SUPERFAMILY UBC-like 36 125 IPR016135 -
Spst2g02417 1297 CDD STKc_EIF2AK4_GCN2_rpt2 434 742 - -
Spst2g02417 1297 Gene3D - 1157 1287 IPR036621 -
Spst2g02417 1297 Gene3D Bira Bifunctional Protein; Domain 2 803 1120 IPR045864 -
Spst2g02417 1297 SMART RWD2001b 41 178 IPR006575 GO:0005515
Spst2g02417 1297 Gene3D Transferase(Phosphotransferase) domain 1 560 754 - -
Spst2g02417 1297 Pfam Protein kinase domain 441 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02417 Spst-Chr2 23846789 23878620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02417 396 760 MAP Kinase Kinase Kinase AT1G63700 24.868 2.00e-21 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Spst2g02417 Pkinase 5.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02417 K16196 - gmx:100797996 1392.48