Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02408 ATGGGAAGCTGCATTTCAACGCAAGGCGTGAGGACACGCAAGAGGACGAAGCATGCCAGCAAGCCCTCGTCGCCGCAAGGGCATGGGCCCACGCGGAGGTCGAGCGTGGTGGTGCGTAGGTCGAGCGTTACGGCTCGTCCGGTGAACGTGGTGGCGAACCCGAGTCCGGGGAACATATTCGATAATTACCAGTTCGGGAAGGAGCTGGGGCGCGGCGAGTTCGGCGTGACGCATCGCGTGGTGGATTTGGTGACTGGCGAAGCGTTTGCGTGCAAGAAGATCGCGAAGACGAAGCTGAGGACGGAGATTGACGTGGAAGATGTGAGGAGAGAGGTGCAGATCATGAGGCACTTGCCTCGGCACCCCAACATTGTGGCCTTCAAGGAGGCTTATGAGGACAGAGACGCTGTTTACCTCGTCATGGAACTTTGTGAAGGTGGCGAACTCTTTGATAGGATCGTTGCTAAGGGCCATTATACCGAGCGTGCTGCTGCTAATGTTGCCAAGACCATACTTGAAGTTTGCAAGATGTGTCATGAGCACGGAGTAATACACAGGGACTTGAAACCTGAAAATTTCTTATTTGCAGATGCAAGCGAGACTGCTGCATTGAAGTCAATTGATTTTGGCCTTTCCACCTTCTATGTGCCTGGTGAAAGATTCAATGAAATTGTTGGAAGTCCTTATTACATGGCTCCCGAGGTTTTAAGACGTAACTATTCCCAAGAAATTGATGTCTGGAGCACAGGGGTGATTCTTTATATTTTACTTTGTGGAGTTCCACCCTTTTGGGCAGAATCCGAGGAAGGGATTGCTCAGGCCATCATTAAGGGTAAAGTAGATTTCACCAGAGATCCTTGGCCTAAAGTTTCTGATGAAGCAAAACATCTGGTTAAGCGCATGCTTGATTCAAATCCATCGACCCGGATAACAGTTCAAGAAGTTCTTGATCATCCCTGGATACAAAATAGGGAGCATAGTCGACCTATTTCTCTTGGAGACCAAGTGAGAATGAGGATCAAGCAGTTCTCCTTGATGAACAGATTCAAAAGAAAGGTTCTTAGAGTGGTAGCCGATAACCTGTCAGATGAGCAAATTGCCACGTTTAAGAAAATGTTCGATATGATGGATAAGGACAAAAATGGAAACTTGTCATTTGAAGAGCTCAAAGATGGCCTTTCAATGATTGGACACCCCATTCCTGACCCTGATGTCCAAATGTTAATGGAAGCTGCAGATATTGACGGAAACGGCACCCTCAACTATGATGAGTTCATCACAATGAGTGTTCATATGAAAAAGATCGAAGGTGATGAGAATCTCTCTGAAGCATTCCGTTACTTTGACAAGAATCAGACCGGATATGTTGAGTTTGAGGAGTTGAAAGATGCCTTATCAGATGATGATTTGGAAGTCATGGACGACCAAGTGATCAAAGACATTCTAAATGATGTTGACTTGGATAAGGATGGTCGAATCAGTTTTCAGGAGTTTAAGGCAATGATGAAGACAGGAGGAGATTGGAAAATGGCCTCGCGCCAGTATTCAAGAGCATTGCTGAATGCATTAAGCTTCAAGATGTTCAAAGACACATAA 1596 0.4637 MGSCISTQGVRTRKRTKHASKPSSPQGHGPTRRSSVVVRRSSVTARPVNVVANPSPGNIFDNYQFGKELGRGEFGVTHRVVDLVTGEAFACKKIAKTKLRTEIDVEDVRREVQIMRHLPRHPNIVAFKEAYEDRDAVYLVMELCEGGELFDRIVAKGHYTERAAANVAKTILEVCKMCHEHGVIHRDLKPENFLFADASETAALKSIDFGLSTFYVPGERFNEIVGSPYYMAPEVLRRNYSQEIDVWSTGVILYILLCGVPPFWAESEEGIAQAIIKGKVDFTRDPWPKVSDEAKHLVKRMLDSNPSTRITVQEVLDHPWIQNREHSRPISLGDQVRMRIKQFSLMNRFKRKVLRVVADNLSDEQIATFKKMFDMMDKDKNGNLSFEELKDGLSMIGHPIPDPDVQMLMEAADIDGNGTLNYDEFITMSVHMKKIEGDENLSEAFRYFDKNQTGYVEFEELKDALSDDDLEVMDDQVIKDILNDVDLDKDGRISFQEFKAMMKTGGDWKMASRQYSRALLNALSFKMFKDT 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02408 531 CDD EFh 369 428 IPR002048 GO:0005509
Spst2g02408 531 Gene3D Phosphorylase Kinase; domain 1 65 148 - -
Spst2g02408 531 Pfam EF-hand domain pair 439 503 IPR002048 GO:0005509
Spst2g02408 531 Pfam EF-hand domain pair 369 428 IPR002048 GO:0005509
Spst2g02408 531 ProSiteProfiles EF-hand calcium-binding domain profile. 364 399 IPR002048 GO:0005509
Spst2g02408 531 PANTHER SERINE/THREONINE-PROTEIN KINASE 57 495 - -
Spst2g02408 531 ProSitePatterns EF-hand calcium-binding domain. 413 425 IPR018247 -
Spst2g02408 531 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Spst2g02408 531 CDD EFh 441 503 IPR002048 GO:0005509
Spst2g02408 531 ProSiteProfiles EF-hand calcium-binding domain profile. 473 508 IPR002048 GO:0005509
Spst2g02408 531 Pfam Protein kinase domain 63 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02408 531 Gene3D Transferase(Phosphotransferase) domain 1 149 329 - -
Spst2g02408 531 SUPERFAMILY EF-hand 360 502 IPR011992 -
Spst2g02408 531 FunFam Calcium-dependent protein kinase 1 65 148 - -
Spst2g02408 531 CDD STKc_CAMK 62 320 - -
Spst2g02408 531 FunFam Calcium-dependent protein kinase 7 330 506 - -
Spst2g02408 531 ProSiteProfiles EF-hand calcium-binding domain profile. 436 471 IPR002048 GO:0005509
Spst2g02408 531 ProSitePatterns EF-hand calcium-binding domain. 449 461 IPR018247 -
Spst2g02408 531 Gene3D - 330 505 - -
Spst2g02408 531 ProSitePatterns EF-hand calcium-binding domain. 486 498 IPR018247 -
Spst2g02408 531 FunFam calcium-dependent protein kinase 13 149 329 - -
Spst2g02408 531 ProSiteProfiles Protein kinase domain profile. 63 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02408 531 SMART efh_1 368 396 IPR002048 GO:0005509
Spst2g02408 531 SMART efh_1 477 505 IPR002048 GO:0005509
Spst2g02408 531 SMART efh_1 440 468 IPR002048 GO:0005509
Spst2g02408 531 SMART efh_1 404 432 IPR002048 GO:0005509
Spst2g02408 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Spst2g02408 531 SMART serkin_6 63 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02408 531 SUPERFAMILY Protein kinase-like (PK-like) 52 339 IPR011009 -
Spst2g02408 531 ProSiteProfiles EF-hand calcium-binding domain profile. 400 435 IPR002048 GO:0005509
Spst2g02408 531 ProSitePatterns EF-hand calcium-binding domain. 377 389 IPR018247 -
Spst2g02408 531 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02408 Spst-Chr2 23750698 23754125 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02408 1 530 EF-hand Containing Proteins AT2G31500 66.976 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst2g02408 Pkinase 8.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02408 K13412 - gmx:100801716 949.503