Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02389 ATGTCAACCACTGCATCCGCCAACGTCGCTTCGTTTCTTCACTTTGATACGCCGATGCTGGACCGGGAGTCTGCGGCACTGCTCCATTTGATTTCCGAGCACGGGGGATACGCATACGTGAGCATGGCGGTGCTGGCGTCCGGCGGCGACATTTGTGCGGCGGAGGCGGCGCGTGAGATGGCGTGGGAGCAGCTTCACTCCGGACCGTGGCACTCCGTTCTGCCCGTGTGGCGCGACGCGTACTCCATGGCGTGCCTTCACGTGGCGCAGTACCATTCCGGCAACGGCGAGTTCAGAGAGGCGCTTAAGGTTTTGGATTTGGGAATCATCATGGGAGGGACGCTCCTCCGCAAGGATTTGGACTCTGCCGTCGCGAAAGTGTCGGAACAAACACGAAGGAGCGTTAGGGTTTCTGATTTAGGGGACTCCGAGCACCGTCTCGTGGATCGGGAATTTGATGTGGCTGAGGTGCTCCAACTTTTACCAATGAAGTCTCTTTCTTCTAAGCTTGTGGTCAAGAAATCAGCACTGTCGTTGGATAAATTCCTGGAGGATCATTACCTGTCACACTCTCCGGTTATTATCAGTGATAGTATGGCTCACTGGCCAGCCAAGGCGAAATGGAATGATGAAGATTACTTGTTGAGAGTCGCCGGTGACCGCACAGTTCCAGTTGAGGTTGGAAAAAACTATTTATGTACTGAGTGGAAGCAAGAGCTGATTACGTTTTCAGAATTTATTCAGCGGATAAAGTCTGATGCCTGTTCTCCTAGTGGCCCTACATATCTTGCTCAGCATCCATTATTTGATCAGATAAATGAGCTTCGGAAAGATATTTTTATTCCTGACTATTGTTTTGCTGGTGGAGGGGAGCTACGATCTCTCAATGCTTGGTTTGGTCCAGCGGGAACAGTAACACCATTACACCATGATCCACATCACAACATACTAGCTCAGGTTGTTGGAAAAAAATACATTAGGCTTTACTCGTCATCTTTGTCTGAGGAACTTTCCCCCCACACTGGTACCATGCTCAGCAATTCCAGCCAGGTTGATTTAGATGACGTAGATGAAAGGAAGTTTCCCAAGGTGCAAGAATTGGAATTTGTAGACTGTATTTTAGAGGAAGGCGAAATGTTATATATCCCGCCAAAATGGTGGCACTATGTGCGCTCTTTGACTACAAGTTTTTCAGTTAGCTTTTGGTGGAGTGAGGGTGAAAGTTCGGATACATCCTAA 1239 0.4907 MSTTASANVASFLHFDTPMLDRESAALLHLISEHGGYAYVSMAVLASGGDICAAEAAREMAWEQLHSGPWHSVLPVWRDAYSMACLHVAQYHSGNGEFREALKVLDLGIIMGGTLLRKDLDSAVAKVSEQTRRSVRVSDLGDSEHRLVDREFDVAEVLQLLPMKSLSSKLVVKKSALSLDKFLEDHYLSHSPVIISDSMAHWPAKAKWNDEDYLLRVAGDRTVPVEVGKNYLCTEWKQELITFSEFIQRIKSDACSPSGPTYLAQHPLFDQINELRKDIFIPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYSSSLSEELSPHTGTMLSNSSQVDLDDVDERKFPKVQELEFVDCILEEGEMLYIPPKWWHYVRSLTTSFSVSFWWSEGESSDTS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02389 412 SMART cupin_9 261 411 IPR003347 -
Spst2g02389 412 Pfam Cupin-like domain 181 405 IPR041667 -
Spst2g02389 412 FunFam lysine-specific demethylase JMJ30 170 403 - -
Spst2g02389 412 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 80 407 - -
Spst2g02389 412 Gene3D Cupin 170 404 - -
Spst2g02389 412 ProSiteProfiles JmjC domain profile. 270 412 IPR003347 -
Spst2g02389 412 SUPERFAMILY Clavaminate synthase-like 176 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02389 Spst-Chr2 23550116 23554001 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02389 165 403 Acyl Lipid Metabolism Gene Families AT3G45880 23.986 1.53e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Spst2g02389 Cupin_8 2e-46 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02389 K24444 - gmx:100813075 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02389 2 23550116 23554001 Spst2g02389 2 23550116 23554001 ECH